Panicum hallii (Hall's panicgrass): 112873131
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Entry
112873131 CDS
T07366
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112873131
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phai01001
]
112873131
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112873131
Enzymes [BR:
phai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112873131
Protein kinases [BR:
phai01001
]
Serine/threonine kinases: Other
VPS15 family
112873131
Membrane trafficking [BR:
phai04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112873131
Autophagy
Autophagosome formation proteins
PI3K complex
112873131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
WD40
Pkinase
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
HEAT
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_TEP1_2nd
PK_Tyr_Ser-Thr
PEP5_VPS11_N
Kinase-like
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Cohesin_HEAT
Tti2
HEAT_GCN1
Beta-prop_Vps41
APH
Motif
Other DBs
NCBI-GeneID:
112873131
NCBI-ProteinID:
XP_025791937
LinkDB
All DBs
Position
1:complement(58075031..58084886)
Genome browser
AA seq
1470 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVTRGRCLKSVRCKHDEGLLLVKVYFKRA
GEPIDLKEHERRLERIRNALKGIEGSHVWPFQVWLQTDKAAYLLRQYFFNNLHDRLSTRP
FLSQIAKKWIAFQLIHAVEQSHSKGVCHGDIKCENVVVTSWNWLYLTDFASFKPTYIPLD
DPSDYSFYFDTGGRRRCYLAPERFYEHGGESQVAADAPLQPSMDIFSLGCVIAELFLDGQ
PLFEYAQLLSYRRGQHDPIIALEKIQDSGIRDMILHMIQLDPKKRLPCRSYLQKYESVVF
PFYFSNFLHKFFADIVPLDSDARVEKTQDNFEKILEIMMGSSTIEQIERSTLSQHSEPSG
RKGMERQILNSPGDSKKNTSVVKKHTPVDHQHIAGDINFLLKEVENRSNSTSTKVTKDMD
HIRPSQLVNPAGSGTGSGLMAQNNVVSHVQKISKSNLCSLVAGYDGQSDTYSFDIFQQTD
SKVSCEGMVLLASLLCSCIRSVKKPELRRASLILLKFSSTYVDDDSRLQLVVPYVIAMLS
DPAAIVRCAALETLCDVLCLVQDFPISDAVIFPEYILPMLSLLPDDTEESVRVCYASNIH
KLALTAYRFLLRSRSIADIRPLDESVEDPRSQSADSPVKKQDKIYGQLAELRKNIYEIVQ
DLAMGQKQTPNVRRALLQDIGYLCYFFGHKQSNDFLLPILPAFLNDHDEQLRAVFFGQIV
FVCYFIGSRSVEEYLLPYLEQALSDGTEAVLVNALDCLTMMCKSGYLRKRVIVGLLGKAL
PLLRYPINWVKRSALRFVAACSESLGAVDTYVYLTPHLRQFLHREPPSLSSETALLSCLK
PPLPKSIFYEALEDAQDMGDILLKGGGKKELIVHGGKYPGKVQSGSSINFEDVARLKGPT
ILSNISLDVKDSVSPDKSLYSGFALHASAGNSSFYDGLSKGIPSYSVCTDKRGLGETHVV
PDSSVYKASIRLPWLEPNRPGVQTRDDYFSSKRRDLSINDSMKSSSSLQGDSIPNSDTGG
LPSFSRSAMNLETGWKPRGILVAHLQEHRLSVNDIAVSNDNTFFVTASDDSSIKIWDTRR
LEKDIAFRSRLTYSMGTSRALCTTMVRSTSQIVVGANDGTLHLFSVDCARGIGSSVERYS
GIVDAKRNDIKEGSILSVVNCSNDSFSPTVLFSTEHCGIHKWDTRTNSESWSFKSSPEEG
YISALVVGQCGNWFISGSSRGVLTLWDNRFLLPVNSWHYSTVSPIEKLCLLIPPPSSISS
SGRPLVFVAAGCNEVSLWNAENGSCHQVFRTASTENEPVMPKAPSRPLNKPSTKDVRRSG
NYKYRIDELNDPPVRHPGIRSLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCIAGPSAKE
VRSAKGDILEKAIGNNECYDIRSSFGVQVVQEMYKQTTTVSGLTPKTQLAVAAADSAGCH
RDAILALASFNLSSQRLISASRDGAVKVWK
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcgcggacgacgcaggcgtcggcgacggagtactacctccacgac
ctgccgtccacctacaacctcgtgctcctcgacgtcgtcactcgcggccgctgcctcaag
tccgtccgctgcaagcacgatgaggggctgctcctcgtcaaggtctacttcaagcgcgcc
ggcgagcccatcgacctcaaggagcacgagcggaggctggagcggattaggaacgcgctc
aaggggatcgagggctcccacgtatggcccttccaggtttggttacaaacagataaggcg
gcatatctcctgagacagtacttcttcaacaacctgcacgatcgactgagcacacgccct
ttcctcagtcagattgcgaagaaatggattgcttttcagttaatccatgcagtggagcag
agccatagtaagggagtttgccatggtgacataaaatgtgagaatgtggtcgttacttct
tggaactggctatatcttacggactttgcatctttcaagccaacttatatcccacttgat
gacccatctgattattcattctactttgacactggaggaaggcgaagatgctatctagca
cctgaaagattctatgaacatggtggggagtcccaagttgcagcagatgcacctctgcaa
ccatctatggatatattttctctcgggtgcgttattgctgaacttttccttgatggccag
ccactttttgagtatgcacaacttctgtcttatcggcgtggtcagcatgaccccataatt
gctctagaaaagatacaagattctggtattcgtgacatgatacttcacatgatccagttg
gatcccaaaaaaaggctaccatgtcgaagctatctgcaaaaatatgaatctgttgtgttc
ccattttatttttcgaactttctgcacaagttctttgcagatattgttccacttgactca
gatgccagggttgagaaaactcaagacaattttgaaaagatacttgaaataatgatgggc
agctcaacaattgaacaaattgagagatctacattgtctcaacatagtgaaccatctggg
agaaaaggcatggaaaggcaaattttaaactcgccaggagattctaaaaaaaacacatct
gtagttaagaaacatactcctgtagaccatcaacatattgctggagatatcaatttcctc
ctcaaagaagtggagaacaggagcaacagcacaagcacaaaggtgacaaaagacatggac
catattaggccctcgcagctggttaatccagcaggaagcggaaccggaagtggtttgatg
gcccagaacaatgttgtatcccatgtgcagaagatctcaaagagcaatttatgctccttg
gtggctggttatgatggccaatcagatacctatagctttgacatttttcaacagacagac
tccaaggtgagctgtgaaggcatggtcttacttgcctcattactctgctcgtgcatacgc
agtgtgaaaaaacctgagctaagaagggccagtctcattcttctgaaattttcgtccaca
tatgttgatgatgacagtcgcttacagctagtggttccctatgtgattgcgatgctttca
gatccggctgccattgtccgctgtgctgctttggaaaccttatgtgatgttctttgtctt
gtgcaagacttccctatcagtgatgctgttatattccctgagtacatcctcccaatgctc
tctttgctccctgatgatacagaggagagtgttagagtttgctatgctagcaatattcat
aaactggctttaacagcttataggttcctacttcgttctcgtagcatagctgatattaga
cctctggatgaatcagtggaagatcccagatcacagtctgcagattcaccagtgaagaag
caagataaaatttatggccagcttgcagaactgaggaaaaatatttatgaaatagtgcaa
gatttggcaatgggtcaaaagcagacacctaacgtccgcagagctcttctgcaggatata
ggttatttgtgctacttctttgggcacaagcaaagtaacgattttcttcttcctatactt
ccagcatttctgaatgaccatgatgagcagctccgtgcagttttctttggccaaattgtc
tttgtttgctacttcattggttcaaggagcgttgaggaatatcttttgccatatcttgaa
caggcactaagtgatggtacggaggctgtccttgtaaacgcacttgattgcttgaccatg
atgtgcaaaagtggttatttgaggaaaagagtaattgttggtctattgggaaaggctctc
cccctgcttcggtatccaatcaattgggttaaacggtctgctttaagatttgttgctgct
tgcagtgagagcttaggggctgttgatacttatgtgtaccttactcctcatctaaggcag
ttcctacacagggagccaccttcattgtcctctgaaactgctcttctttcatgccttaag
cctcctctgcctaaatcaatcttttacgaagctttagaggatgctcaggacatgggcgac
attttactgaagggcggtggcaagaaagaactgatagtacatggtggaaaataccctggt
aaagtacaaagtggatcctcgataaattttgaagatgttgcacgactgaaaggccctact
attttgagcaatatatctttggatgtcaaagattcagtttctcctgacaaatcgttatat
tctggttttgcattacatgcatctgctgggaatagttccttttatgacggtttatctaaa
ggaataccatcatattctgtttgtactgataagcgaggtttaggagaaacacacgtggtc
cctgattcttcggtgtataaagcatcaataaggctaccttggttggaacccaaccgccca
ggcgtgcagactagggatgattatttcagtagcaagcgtcgagatttaagcatcaatgat
tctatgaagagcagttcatctttgcaaggggatagcattccaaactctgatactggagga
ttgccgtccttctccagatcagcaatgaacctggagactggatggaagccccgtggaatt
ctagtggcacatctccaggagcatcgcttgtctgtcaacgatatcgccgtgtcaaatgat
aataccttttttgtgaccgcgtctgatgactcaagtatcaagatatgggatacaagaagg
ttggaaaaggacattgccttcagatctaggttaacgtacagcatgggtactagccgagct
ctatgtacgacaatggttcgcagtacttcacagattgttgtcggtgcaaacgatggaaca
ctgcacttgttttctgttgattgtgcacgcggcattggaagttctgtggaaaggtattct
ggcattgttgatgcaaaaaggaatgatattaaagaaggctcaattctcagtgttgtgaat
tgttcaaacgacagctttagcccaactgtccttttcagcactgagcattgtggcatccat
aaatgggatacaaggaccaactcagaatcctggtcatttaaatcatcacccgaggagggc
tatatatcagcccttgttgtgggccagtgtggaaattggttcatctcaggttcttcaaga
ggtgtccttacattgtgggataataggtttttgctgcctgttaactcgtggcactattca
acagtaagccctatagagaaattgtgcttgcttatacctccaccaagctcaatatcttct
tctggaaggccattggtttttgttgccgccggctgcaacgaagtttccctatggaatgct
gagaatggaagctgccaccaggtgtttagaacggcaagcaccgagaatgaacctgtgatg
ccaaaggcaccatcaagacctcttaacaagccaagcaccaaagatgtaagacgatcaggc
aattataagtacagaatcgatgaattgaacgacccacctgtacgccatccgggcatacgc
tctttgcttcccttacctgggggtgatctattgactggaggaacagacttgaaaattcgt
tactgggatcaagccagacctgagcaaagcttttgtattgctggtccctcggccaaagaa
gtccgttcggcaaaaggagatattttggagaaagcaattggaaacaatgagtgttatgat
ataagatccagttttggagtacaagtcgtgcaggaaatgtataaacagactaccactgtg
tctggtttgacgcccaagacacagctcgcagtggccgctgcagactccgccgggtgccac
cgagatgcaatactcgcgctggcatccttcaatctgtcgagccagaggttgatatcagcc
agcagagacggagctgtcaaagtatggaaatag
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