Panicum hallii (Hall's panicgrass): 112873785
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Entry
112873785 CDS
T07366
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03040
Spliceosome
phai04141
Protein processing in endoplasmic reticulum
phai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112873785
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112873785
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112873785
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112873785
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112873785
03009 Ribosome biogenesis [BR:
phai03009
]
112873785
03110 Chaperones and folding catalysts [BR:
phai03110
]
112873785
04131 Membrane trafficking [BR:
phai04131
]
112873785
03051 Proteasome [BR:
phai03051
]
112873785
03029 Mitochondrial biogenesis [BR:
phai03029
]
112873785
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112873785
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
112873785
Spliceosome [BR:
phai03041
]
Complex B
Other components
Prp19 complex
112873785
Complex C
Prp19-CDC5 complex
112873785
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
112873785
Chaperones and folding catalysts [BR:
phai03110
]
Heat shock proteins
HSP70 / DNAK
112873785
Membrane trafficking [BR:
phai04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112873785
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
112873785
Proteasome [BR:
phai03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
112873785
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
112873785
Exosome [BR:
phai04147
]
Exosomal proteins
Proteins found in most exosomes
112873785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DACNG
Motif
Other DBs
NCBI-GeneID:
112873785
NCBI-ProteinID:
XP_025792623
LinkDB
All DBs
Position
9:complement(65479309..65481691)
Genome browser
AA seq
650 aa
AA seq
DB search
MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVAPGSADKPMIGVKFRGEEKQFSA
EEISSMILNKMKETAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKSSSDGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRLVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILTGEGNEKVQDLLLLDVSPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDMDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVDAKNSLENYAYNMRNTIRDDKIASKLPEAEKKKIDDAIEGAITWLDNNQLAEVDEFED
KMKELEGICNPIIAKMYQGAAGPDMAGGMAEDAPAAGGSSGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaagggagacgggccggcgatcgggatcgacctcggcacgacctactcgtgc
gtcggggtctggcaacatgaccgcgtcgagatcatcgccaacgaccagggcaaccgcacc
acgccgtcgtacgtcgcgttcaccgactccgagaggctcatcggcgacgccgccaagaac
caggtcgccatgaaccccatcaacaccgtcttcgatgccaagcggctcatcggccggcgc
ttctcggacgcgtcagtgcagagcgacatcaagctgtggcctttcaaggtggccccgggc
tccgccgacaagcccatgatcggggtgaagtttaggggcgaggagaagcagttctcggcg
gaggagatctcctccatgatcctaaacaagatgaaggagacggccgaggcctacctcggc
agcaccatcaagaacgccgtcgtcaccgtcccggcctacttcaacgactcccagcgccag
gccaccaaggacgccggcgtcatctccggcctcaacgtcatgcgcatcatcaacgagccc
accgccgcggccatcgcctacggcctcgacaagaagtcgagcagcgacggcgagaagaac
gtgctcatcttcgacctcggcggcggcaccttcgacgtctcgctcctcaccatcgaggag
ggcatcttcgaggtcaaggccacggccggcgacacccacctggggggcgaggacttcgat
aaccgcctcgtcaaccacttcgtgcaggagttcaagaggaagaacaagaaggacatcacc
ggcaaccccagggcgctccggcgtctgaggacggcctgcgagagggccaagaggacgctc
tcatctaccgcccagaccaccatcgagatcgactccctctacgagggcatcgacttctac
acgaccatcactcgcgcccggttcgaggagcttaacatggacctcttccgcaagtgcatg
gagcccgtggagaagtgcctccgcgacgccaagatggacaagagcagcgtgcacgacgtc
gtgctcgtcggcggctccacccgcatcccccgcgtgcagcagctgctccaggacttcttc
aacggcaaggagctctgcaagagcatcaaccccgacgaggccgtcgcgtacggcgccgcc
gtccaggcagccatcctcaccggcgagggcaacgagaaggtgcaggacctgctcctgctc
gacgtctcgccgctctcgctcggcctggagacggccggaggcgtcatgaccgtgctgatc
ccgaggaacaccaccatcccgaccaagaaggagcaggtcttctccacctactccgacaac
cagcccggcgtgctcatccaggtgtacgagggtgagagggcccggaccaaggacaacaac
ctgctcggcaaattcgagctctccggcatccctccggcgcccaggggcgtcccccagatc
accgtgtgcttcgacatggacgccaatggcatcctgaacgtgtcggcggaggacaagacc
accggccagaagaacaagatcacgatcaccaacgacaagggccggctgagcaaggaggag
atcgagaagatggtgcaggaggccgagaagtacaaggccgaggacgaggagcacaagaag
aaggtggacgccaagaactcgctggagaactacgcctacaacatgcgcaacaccatcagg
gacgacaagatcgcgtccaagctcccggaggccgagaagaagaagatcgacgatgccatc
gagggggccatcacctggctggacaacaaccagctcgccgaggttgacgagtttgaggac
aagatgaaggaactggagggcatctgcaaccccatcatcgccaagatgtaccagggcgcc
gctggtcctgacatggccggtggcatggctgaggatgctccggcggccggcggcagcagt
ggtgctggacccaagatcgaggaagtcgactaa
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