Panicum hallii (Hall's panicgrass): 112873846
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Entry
112873846 CDS
T07366
Name
(RefSeq) nuclear poly(A) polymerase 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112873846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112873846
Enzymes [BR:
phai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
112873846
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
112873846
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
MTPAP-like_central
PAP_RNA-bind
Polbeta
Motif
Other DBs
NCBI-GeneID:
112873846
NCBI-ProteinID:
XP_025792709
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All DBs
Position
9:63684115..63689651
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AA seq
535 aa
AA seq
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MALDLAVAGSAARKAEVQTLAPVLLMGPPPPPPIPPTPGMYLPGPPPPGVLLPRPIPAPL
TREVIAHMDECRSRSLLKFISDVGIMPSLEDEQRRERVVRELGKIVMDWAKRVAYEQRKQ
HWITSAAVLTFGSYALGAYGPESDIDVLCVGPYIASLQHHFFVVLRHMLEGRPEVSELHS
IEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAIHAFDPRVLENVDGASWKCLSGVCVNR
QIIQLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTL
LSLFFEIFVHWPWPLPVSLLDPPALCRGTDGCSLMPIMLPCIPPEFCSSSMTQSTFSKIK
EELRRGYALTKDTRTTDFDWSWLFAPFPYGARYKCFLRIFLSAPMAEELRDWVGWVKSRF
RNLILKLESLGVYCDPDPLEQADHTINEPNVVFFWGLMYRRNIQICTSSLKEDFMKSVLN
NIYGKEKCAHSDITMSIVGPPQLPKSVFDHSVYSEKLPPHMMGHQLMKQSYNAVS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgacctcgctgtcgcgggctcggcggcccgcaaggccgaggtccaaacccta
gcgcccgtgctgctcatgggcccaccgcctccgccgccgatcccgccgacgccggggatg
tacctcccaggtcccccgcccccgggggttctcctgccgcgcccgatccccgcaccgctt
actcgcgaggtcatcgcgcacatggacgagtgccggagccgctccctcctcaagttcatt
tccgacgtggggattatgccttcgctagaggacgagcagaggagggagcgggtggtacgc
gaactcggcaagatagtgatggattgggcaaagagggtggcgtacgagcagaggaaacaa
cattggatcacatcagccgcagtgttgacctttggctcctatgccttgggggcatatgga
cctgaatccgatattgatgttctctgtgtcggtccctatattgcatcactgcaacatcat
ttttttgttgtcctgcgacacatgcttgaagggaggccagaagtatcagaattgcattca
attgaaggagctaaggttccattgatgcgttttaaattcaacggaattttagttgacttt
ccttatgtccaactcccagtgatcaatgctgcagaggctatacatgcatttgatccccgt
gtgctagagaatgttgatggggcaagctggaaatgtctatctggagtttgtgttaataga
caaatcattcaattggttcctaatatgaagaagttccaatatctgttgcggtgtcttaaa
ctatgggcaagaaaaagaggacttcattgccatctacttggcttctttgctgggattcat
ttggcgattcttgctgcatatgtttgtcgcagacatccaaatgctagtattaatactttg
ttatctttgttctttgagatttttgttcattggccttggcctctcccagtgagtttgctt
gatccgccagctctttgtcggggtactgatgggtgctctctcatgcccataatgttgccc
tgtattccaccagaattttgctcttctagtatgacacaaagtactttcagcaaaatcaaa
gaagaacttcggcgtggttatgctttgaccaaggataccagaactactgattttgactgg
agttggctctttgcaccttttccatacggtgcaagatacaaatgctttctccgcatattt
ctctctgctccgatggctgaagaattacgtgactgggttggatgggtgaaatcacgtttc
cgcaaccttattctcaagctcgagagtcttggtgtttactgtgacccagatccattggag
caagctgatcataccattaatgagccaaatgttgtattcttctggggtctcatgtacaga
aggaatattcaaatatgtacaagttctctcaaagaagacttcatgaaaagtgtcctgaat
aacatctatggaaaggaaaaatgtgcccattcggatatcacaatgtccattgttgggcct
ccccagctgcctaaaagtgtttttgatcactcagtttactcagagaagctgccaccacat
atgatggggcaccaactaatgaagcagagctacaatgcagtcagttag
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