Panicum hallii (Hall's panicgrass): 112873988
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Entry
112873988 CDS
T07366
Name
(RefSeq) syntaxin-related protein KNOLLE-like
KO
K08486
syntaxin 1B/2/3
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112873988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112873988
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112873988
Membrane trafficking [BR:
phai04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112873988
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112873988
Exosomal proteins of other body fluids (saliva and urine)
112873988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
Se-cys_synth_N
NRD1_2
Motif
Other DBs
NCBI-GeneID:
112873988
NCBI-ProteinID:
XP_025792898
LinkDB
All DBs
Position
9:complement(5580073..5581489)
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AA seq
312 aa
AA seq
DB search
MNDLMTKSFMSYVDLKKAAMKDLEAGGDGIELPESGGVTDERLRGFFEEAEAVKAEMAAI
RDALDRLHAANEEGKSLHQADALRAHRGRVNADIVAVLRRARDIRARLESLDRANAAQRR
LSAGCREGTPLDRTRTAVTAGLRKKLKDLMLDFQALRQRMMSEYKETVERRYYTLTGEVP
EEEVIERIISDGRGEELLGAAVAEHGKGAVLAAVHEIQDRHDAAREVERSLLELHQVFLD
MAVMVETQGEKLDDIESHVANASHYVQGGNKELGKAKEYQRSSRRCLCIGIIILLLLVLL
VIVPIATSFSKS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctcatgaccaaatccttcatgagctacgtcgacctgaagaaggcggcgatg
aaggacctggaggcggggggcgacgggatcgagctcccggagtctggcggcgtcacggac
gagcgcctgcgcgggttcttcgaggaggcggaggcggtgaaggcggagatggcggcgatc
cgcgacgcgctcgaccgcctccacgccgccaacgaggagggcaagtcgctgcaccaggcc
gacgccctccgcgcgcaccgcggccgcgtcaacgccgacatcgtcgccgtgctgcgccgc
gcccgcgacatccgcgccaggctcgagtccctggaccgcgccaacgccgcgcagcggagg
ctctccgcggggtgccgcgagggcacgccgctggaccgcacgcgcaccgccgtcaccgcg
gggctccggaagaagctcaaggacctcatgctcgacttccaggcgctgcggcagcggatg
atgtccgagtacaaggagactgtggagcgccgctactacacgctcaccggggaggtcccc
gaggaggaggtgatcgagcgcatcatctccgacggccgcggcgaggagctcctgggcgcc
gccgtcgcggagcacggcaagggcgccgtgctcgccgcggtgcacgagatccaggaccgc
cacgacgcggcgcgcgaggtggagcgcagcctcctcgagctccaccaggtgttcctcgac
atggccgtcatggtggagacgcagggggagaagctcgacgacatcgagagccacgtcgcc
aacgcctcccactacgtgcagggcggcaacaaggagctgggcaaggccaaggagtaccag
cggagcagtcgcaggtgcctctgcatcggcatcatcatcctgctgctcctcgtcctcctc
gtcatcgtgcccatcgccaccagcttcagcaagtcttga
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