KEGG   Panicum hallii (Hall's panicgrass): 112874003
Entry
112874003         CDS       T07366                                 
Name
(RefSeq) autophagy-related protein 18b
  KO
K17908  autophagy-related protein 18
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:phai00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    112874003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112874003
   03029 Mitochondrial biogenesis [BR:phai03029]
    112874003
Membrane trafficking [BR:phai04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    112874003
Mitochondrial biogenesis [BR:phai03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    112874003
SSDB
Motif
Pfam: PROPPIN Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WD40 BCAS3_WD40 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 112874003
NCBI-ProteinID: XP_025792925
LinkDB
Position
1:complement(57854042..57857476)
AA seq 371 aa
MASSSAPSQVICASFNQDNSLFSVGTKEGLKIFDSRNGRLCYENNLGGLNIVEMLFSTSL
LAIVGTGEQRAMSPRRLCLFNTQTKQSKRDLNFKTSILAVRLNMKRLVVVLQDRTFVYDL
NSTTILEEIETGPNTKGLCAFAPNSEECYLALPASTSKGSALVYKTSEPELICQIDAHQA
PLAAMVFSSNGMYLATASEKGTMVRVHLVTQATKSHSFRRGTYPSTIYSLAFSPSVDLPD
VLVATSSSGSLHLFFLDAARNGRRQANTLLSSVIPGSVTDALDPANHHVIHNVVPADIKS
YLAVQSVENSQNSSKLPALKTVIYIVTQDGYFREYVIGTTKSNESSWLLEREFNFLDSGL
STLKHNEQHID
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggcgagcagctcggctccgtcgcaggtcatctgcgcctccttcaatcaggacaacagc
ttgttttctgtggggacgaaggaaggcctcaagatcttcgactcccgtaatgggaggctc
tgctatgaaaacaatcttgggggattaaacattgtggaaatgctatttagcacaagcctt
cttgccattgttggaaccggtgaacagcgtgcaatgtctcctcgccgtctctgcttgttc
aatacccaaacaaaacaatcgaagagagatctgaactttaagacttcaattttggctgtt
cgattaaatatgaagaggcttgttgttgtattgcaagacaggacttttgtttatgatcta
aatagcactactatcttggaagaaattgaaacaggacccaatacaaaaggtctatgtgca
tttgctcctaattcagaagagtgttatttggctttgccagcaagcacatctaaaggatct
gctttagtgtacaaaacatcagaacctgaattaatatgtcagatagatgcccatcaggct
ccattagctgcaatggttttttcttcgaatggcatgtacctggcaacggcttctgaaaag
ggtactatggttagagtacatctcgtcacacaagcaaccaagtcacatagttttcgccgg
ggaacatacccatcgacgatctattcactggcatttagtccatctgttgatctgcctgac
gttcttgttgccacaagttcatcaggctctttgcacctatttttccttgatgctgccaga
aatggaaggaggcaagcaaatacattgctcagttcagtaattcctggatcagtaactgat
gctttggacccagctaatcatcatgttattcacaatgttgtccctgcagacatcaagagc
tatctggcagtacagagtgttgaaaattcgcaaaattcttccaaactacctgcgttgaag
actgtaatttacattgtaacacaagatgggtacttccgggagtatgtgatcggcacaacc
aaatcaaatgaatcttcatggttgttggagcgtgaattcaatttcctggattctggcttg
agtactctcaagcacaatgagcagcacatagactga

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