Panicum hallii (Hall's panicgrass): 112874186
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Entry
112874186 CDS
T07366
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112874186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112874186
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
112874186
INO80 complex (yeast)
112874186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
112874186
NCBI-ProteinID:
XP_025793165
LinkDB
All DBs
Position
9:complement(62019937..62033587)
Genome browser
AA seq
1505 aa
AA seq
DB search
MDARRAPPRGGGANGGGGLSYSTLFNLEPLLNFRVPVPEDLARYGHSSPNGSASSEGQGS
LLDQYNGINDASHGLHRKRKRHLDGASDDDEADPYSNQITEEHYRTMLSEHVQKYKRSKF
REGAFGSDPPCVASPQIKDKSGGKKTMKHRSDSRNVATLDEVEASHEYSGIECIKTHGGF
NKLVATLDSTYLDMGDNIRYLVPEGYDKLASSLNLPVSSDIRVEEHFLKGMLDLRTLAAM
LGTDQKFEASNRGGLSEPLPQFESLQERVKVQKFSLQVTEDPFAIPEGAAGRIRRYIISE
AGNLQVHYVKVLEKGDTYEIIERSLPKKQIIKKEPSVIVKEEAEKTYKLWQSLATKSIPK
HHRNFNALVKKRQVDAKRFSDSCQREVKLKVSRSLKLMRCAAIRTRKLARDMLIFWKRVD
KEQYELRKKEEREAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKAGASAPPDE
EDVPDEDGEEDPEEAQLKREALRAAQHAVSQQKMKTNAFDSEVGRLRQTSEFGLPTDDSC
SMDPNKIDLLHPSTMPEKSSVQTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGL
GKTVQAMAFLAHLAEDKNIWGPFLVVAPASVVNNWAEELIRFCPDLKILPYWGPERMILR
KNINPKRLYRRDASFHILITNYQILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWRTLL
GFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGALNE
HQLSRLHAILKPFMLRRVKIDVIAEMTKKKEEIVPCKLSSRQQVFYQAIKNKISLNELLD
GSRGNLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPPFGELQDV
HYAGKRNPITFEIPKLVYEGIIRNVEISGNGCGFRSGYLNRLFNIFLPSNIHCSAIPEAN
SSNESVLSSGAFGFTRLSNLSPVEASFLATSSLFERLAFLAMQLNMKYTDEIMDAFVDSE
GPRFSQIDATSIHAVGRLLLSSTKDIPSLLRTKIGTGPGDCPYEALVLSHHDRLASNIRL
LRSAYAFIPPARAPPVNVWCADRNFAYKFTDEMHDPWAKKLFLGFARTSEFNGPRKPVGL
HPLIQEVHTDLPILEPMLRLPYRIFGSSPPMSNFDPAKMLTDSGKLHTLDMLLRRLRAEG
HRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDVFVFLLSTR
AGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKILQR
AKQKNAVQELVMKGKHIQDDHLMRQEDVVSLLLDDTQIAHKLKEISMQAKDRQKKRRAKG
IKVDKEGDLTLEDLDDATAEAVDQDNTTNKKKKSSHKKHPKMHDNDNVDKNGEAPTGGDL
TGSGHTENEQVAEPRPKRSKRLMKGMSDDKEPAAAADLEKPADEVENLTGHDYDDTEEVQ
DVTSA
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcgccgcgcccccccgcgcggcgggggcgccaacggcggcggcggcctctcc
tactccacgctattcaacctcgagcctttgttgaacttcagggttcctgtaccagaagat
cttgcccgctatgggcatagcagcccgaatgggagtgcaagcagtgaaggtcaaggatcc
ttgttggatcagtacaatggtataaatgatgcttcgcatggcctgcatcggaagagaaaa
aggcatcttgatggtgccagcgatgatgatgaggcagatccctatagtaaccaaataaca
gaggagcactaccgtacaatgctcagtgaacatgtccagaagtacaagaggtcaaagttc
agggagggtgcttttggttctgatcctccttgtgttgcaagcccccaaataaaagacaaa
agtggtggtaaaaagactatgaagcacagaagtgattctaggaatgttgcaacattggat
gaagtagaagcctcacatgagtacagtgggatagaatgtattaaaacccatggtggtttt
aataagcttgtagcgacccttgattccacctacttagatatgggggataatatacgctac
ttagttcccgagggttatgataagttagcatcatcccttaatctgcctgtttcttctgat
atacgtgttgaggaacactttttgaagggaatgctagatttgcgcactctagcagcaatg
cttggtactgaccaaaagtttgaggcttccaatcgtggtggattatcagaacctctgcca
cagttcgaatctctccaagaaagggtaaaggtgcagaaattttctcttcaagttactgag
gacccctttgcaattccggaaggagcagctgggaggatacggaggtatattatatcagaa
gctggaaatttgcaggttcattatgttaaagtcttggaaaaaggagatacatatgagatt
atcgagcgtagcttaccgaagaagcaaataataaagaaggaaccttctgtaatcgtgaaa
gaagaggcagaaaaaacttacaaactatggcagtctcttgctaccaaaagcatcccaaag
catcacaggaatttcaatgctttggtaaagaaacggcaagtagatgcgaagcgcttctct
gatagttgccaacgggaggtaaagctcaaagtaagccggtcactgaaactgatgagatgt
gctgcaatacgtacaaggaagctggctagggacatgctgatattttggaaaagagtagac
aaagaacagtatgagttgaggaaaaaggaagaaagagaagctgctgaagctttgaagcgc
gaggaggagctgcgtgaagcaaaaagacagcaacagaggctaaactttctgctttcacaa
acagagctttatagccatttcatgcaaaacaaggctggtgcctcagcaccgcctgatgag
gaagatgtccctgatgaagatggggaagaagatcctgaggaagctcaattaaagagagag
gctttgagagcagctcagcatgccgtctctcaacaaaagatgaagacgaatgcatttgat
agtgaagttgggaggcttcgtcaaacttctgagtttggtcttccaactgatgattcatgt
agcatggatccaaacaagattgatctattacacccctcaacaatgcctgagaagtcatct
gtgcagacaccagagttgtttaagggtgtattaaaagagtatcagctaaagggcttgcag
tggctggttaattgttatgaacaggggttgaatggcattcttgctgatgagatgggtctt
ggcaaaaccgttcaggctatggcattcctggctcatttggctgaggacaaaaatatatgg
ggcccctttctagtggtggctcctgcatctgttgtgaataattgggctgaggagttgatt
agattctgtcctgacctaaagatacttccttactggggcccagagaggatgattctgcgg
aagaatatcaaccccaagcgtctttatcgtagagatgctagctttcacattcttattaca
aactatcagatacttgtgaatgaagagaagcttctgagacgtgttaagtggcaatacatg
gtactggatgaggcccaggccataaaaagttcaagcagccagcgctggaggacgttgctg
ggctttaactgtagaaatcgtttactgctcactgggacgccgatacagaataatatggct
gagttatgggcacttcttcatttcatcatgcccactctatttgacagccacgaacaattt
aacgagtggttctcaaagggtattgagggtcatgctgagcatgggggagctttgaatgaa
catcagcttagtcgactgcatgctattttgaaaccctttatgctgcgccgggttaagatt
gatgtcattgctgaaatgacaaaaaagaaagaagaaattgttccctgcaaattgagttct
cgtcagcaagtcttctatcaagccataaaaaataagatctctcttaatgagttgcttgac
ggaagtcgtggcaatctaaatgataaaaagttacttagcctgatgaatattgtcatgcag
ctacggaaggtctgcaatcacccggaactgttcgagcgcaatgagggaagttcttacttt
tactttgctgatatcccaaactcacttctctctcccccgttcggcgaattacaagatgta
cattatgccggcaagagaaatcctataacgtttgagattccaaagttagtttatgaggga
atcatccgcaacgtggaaatttctggaaacggctgtggatttcggagtggatatttgaac
aggctgtttaatatatttttgcccagcaatatccattgttcagccattccggaagctaat
tcatcgaatgagtctgttctatcatccggtgcattcggctttacacgtttatcaaatctg
tccccagttgaagcttccttcttggccacttcatcattgtttgagagactagcatttttg
gcaatgcaattgaatatgaagtacactgatgaaattatggatgcattcgttgattcagaa
ggtccccggttcagtcagattgatgccacaagcattcatgcagttggtcggttgttgctt
tcttctacaaaggacatacccagtttgcttagaacaaagattggaactggcccaggtgat
tgcccatatgaagcactggtgctttctcatcatgacaggcttgcctcaaacataaggctt
cttcgttcagcatatgcttttattccgccagctagagcaccgcctgtaaatgtttggtgc
gccgatagaaattttgcctacaagttcactgatgaaatgcatgatccatgggccaagaaa
ctgttcctgggatttgctcgtacttctgagttcaatggtcctagaaaaccagttggtctt
catcctttgatacaagaagtacatactgatttgcccatccttgagccgatgctgcggcta
ccttataggatttttgggtcttctccgccgatgagtaattttgatccagctaaaatgctc
accgattctgggaagctccacaccttagatatgctattacggcgccttcgagctgaaggt
catcgtgtgctcctttttgctcagatgactaaaatgttggacatccttgaggattacatg
aatttcagaaaattcaagtacttcagacttgatgggtcttctgcaatctcggaccgtcgt
gacatggtccgagatttccagaataggaatgatgtatttgttttcttgttaagcacaaga
gctggtgggcttggtattaatttgaccgctgctgatacagttattttttatgaaattgac
tggaatccaacacaagaccagcaggcaatggatagaacacacagacttggtcagacaaaa
gaggttactgtgtacagacttatatgcaaagatactattgaggagaaaatattgcaaaga
gcaaagcagaaaaatgcagtgcaagagttggtcatgaaggggaaacatatccaggacgat
catttgatgagacaagaggacgttgtttcgttacttcttgatgacacacagattgcacat
aagttgaaagaaatatccatgcaggcaaaggatcggcaaaagaagagacgagcgaagggc
atcaaggttgacaaagaaggagatttaacgctcgaggacttggatgatgctactgcggaa
gctgtagatcaagataacacaaccaacaaaaagaagaagagctcgcacaagaaacatccg
aaaatgcatgataatgacaatgtggacaagaacggagaggcccctacaggaggtgatctc
acggggagtggtcacacagaaaatgaacaggtcgccgaaccaaggcctaaaagatcaaaa
aggctgatgaagggcatgagtgatgataaggaaccagctgctgctgctgatcttgagaaa
cctgcagatgaagtggaaaatctcacaggacatgattatgatgacacagaagaggtgcaa
gatgtcacttcagcttaa
DBGET
integrated database retrieval system
