Panicum hallii (Hall's panicgrass): 112874290
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Entry
112874290 CDS
T07366
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112874290
Enzymes [BR:
phai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
112874290
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112874290
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
RrnaAD
Motif
Other DBs
NCBI-GeneID:
112874290
NCBI-ProteinID:
XP_025793313
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All DBs
Position
9:1316286..1319334
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AA seq
456 aa
AA seq
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MGRTPANGKRSPPPPPPPGRCHFWLPSKRRHCANSSLPSSQYCGNHLPESASGAGSRVPC
PVDPSHTVLEENLEAHVGKCPLKKQVAALAAQPYYSKGINSGGAEAGRGITSAEKRAAVY
RLTEDEFRGLLGKIRSVHAAAAVAMRESYLITSACDKWMGGQVDRKVPYQEKHVAQQASI
VGNMEEFDLLRKGSTEVVAGENVAASAQAVVEFGAGRGYLTQVLVDCYGIRNVFLVERRS
YKLKADRSLRQNEGVTLKRLRIDIEDLNLQGIEALRGLKYLAIGKHLCGPATDMTMTCCL
PEQYDQTEERVHGKRNLHGLALATCCHHLCQWKHYANKSFLSGLSITEEEFHAMTWFSSW
AVDGDHSSPDSYVEVEDTSSEIREPEKPDPENIGIEKIIRSIPTGERASLGFMCKDIIDT
GRLLWLRHKGLVADLVSYVPSNISPENRLLIAKCTS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtactccggcgaacggaaagcgctcaccgccaccgcctcctcctccaggccgt
tgccacttctggctcccaagcaagcgccgccactgcgccaactcctccctcccgtcctcg
cagtactgcggaaaccacctacccgagtccgcctctggcgccggcagccgcgtcccgtgc
cccgtcgacccctcccacacggtgctcgaggagaatctggaggcgcacgtcggaaagtgt
cccctgaagaagcaggtcgccgcgctcgccgcgcagccgtactactccaagggcatcaac
tccggcggagccgaggccggccgcggcatcacgtcggcggagaagcgtgcagccgtctac
aggcttacggaggatgagttccggggtctgcttggtaagatccgatcggtgcacgcggcc
gccgccgtggccatgcgcgagtcgtatctgatcaccagtgcttgcgacaaatggatgggt
gggcaggtcgataggaaggtgccataccaagagaagcatgtcgcgcagcaggcgtccatt
gttgggaacatggaggaatttgacttgctgcgcaagggtagcactgaggtggtcgctggg
gagaatgtggcagcaagtgctcaggcggttgtggaatttggagctggaagagggtacttg
actcaggtgctggtggactgttatgggattaggaacgtgttcctggttgagagacggtcc
tacaagcttaaggctgatcgaagcttgcgtcaaaacgaaggtgttaccttgaagcgtttg
agaattgatattgaggatttgaacctgcagggaatagaggcattgaggggacttaagtat
ctagcaattggaaaacatctctgtggacccgcaacagatatgaccatgacttgctgtctc
cctgaacaatatgaccaaacagaagaaagggtccatggcaaacgaaatcttcacggcctt
gctctagctacctgctgccaccatctttgtcagtggaagcattacgcgaataaatctttc
ctctcaggactaagtattacagaggaagagttccatgccatgacatggtttagcagctgg
gctgtggatggtgatcacagctccccagattcctatgtggaagttgaagacacgtcttct
gaaatcagagaaccagagaagcctgatccggagaacatcggaattgagaagataatccga
agtataccgacaggggagagggcctctttgggattcatgtgtaaagacatcattgatacc
gggaggctgttatggcttagacataagggtctagttgcagatcttgtaagctatgttcca
tcaaacatttcaccggagaaccgtctactaatcgcaaagtgtacatcttga
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