Panicum hallii (Hall's panicgrass): 112874368
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Entry
112874368 CDS
T07366
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112874368
Membrane trafficking [BR:
phai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112874368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
112874368
NCBI-ProteinID:
XP_025793436
LinkDB
All DBs
Position
9:complement(63144331..63158903)
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AA seq
1843 aa
AA seq
DB search
MEPAAAAAGEGQRFKRIPRQAWSGNLELDPLLNENLEQWPHLNELVQCYKADFVKDDGKY
GRYESVAPPSFQNQIFEGPDTDIETELQLGNARHSKPEDATEDDTPSTSGRQIYETGSSA
SSSKVHCSLSPLPAYEPAFDWENERSLIFGQRVPESLPAINNRFLHGLKITVKVLSLSFQ
AGLVEPFSGTICLYNRDRREKLSEDFYFHILPTDMQDAQISLDRRGVFSLDAPSPSVCLL
IQLEKAATEEGGVTPSVYSRKEPVHLTEKEKQKLQVWSRIMPYKESFAWAMIPLFEGNHA
GGLGDAASPSSPLAPSISGSSSQDSIVDPISKLTLDGKLNHYSSGSSVIVEISNLNKVKE
SYIEDSLHDPKRKVHKPVKGVLRLEVEKLHDSHNDVDNVSEGGSMANDLNDAGDLNNGRC
SRSSFDGIRSSLNSSAVAQKYAHHNGKISDADNGDNFQAFDFRMMTRSEPFSQLFHCLYV
YPLTVSLSRKRNLFIRVELRKDDSDIRKPPLEAVHPRERNTMLQKWGHTQIAVGTRMASY
HDEVKISLPALLTPQHHLVFTFFHVDLQMKLEAPKPVIVGYSVLPLSTHIQLLSDVSLPI
LRELVPHYLQESGKERMDYLEDGKTVFRLRLRLCSSLFPVNERIRDFFVEYDRHTLHTSP
PWGSELLEAINSLKNVESTALLQFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTRRVQ
QESPDGAERNRFLINYVDFAFDDFGDRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDDVL
AMAWFFLELIVKSMGLEQSRLFYHNLPLGEDVPPLQLKEGVFRCIMQLFDCLLTEVHERC
KKGLSLAKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVLHDCKLTFLQII
CDHDLFVEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICKHEFDARY
QKSEDKLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLVVILQIIRNLDDATLIKAWQQ
SIARTRLFFKLLEECISHFEHNKTGDSMLLGASSRSPDVERPASPKYSERLSPSVNAYLS
EASRHEIRPQGTPENGYMWNRVSPQLSSPNQPYSLREALAQAQSSRIGSTARALRESLHP
VLRQKLELWEENLSTAVSLEVLGITEKFSVAAGTRSITTDYAKLDCITSILMGLLSRSQP
LAFWKAFLPVVYNIFNLHGATLMARENDRFLKQIAFHLLRLAVFRNDSIRKRAVVGLQIL
VRNSFNYFKNTTRLRVMLTITLSELMSDVQVTQMKSDGSLEESGETRRLRKSLEEMADVR
SKDLLKDCGLPVTALEAAPEGSSDNRWSWVEVKHLSKCLVQALDAGLEHALLGSVVTLDR
YAAAEGFYKLAMAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVGRN
DAVWSKEHVASLRKICPIVSTDVSAEASAAEVEGYGASKLTVDSAVKYLQLANKLFAQAE
LYHFCASIQELIIPVYKSRRSYGQLAKCHTSLTNIYESILEQEASPIPFIDATYYRVGFY
GERFGKLNKKEYVFREPRDVRLGDIMEKLSHIYEAKMDGNHTLHIIPDSRQVNADELQPG
VCYLQITAVDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQ
WKRRTVLQTEGSFPALVNRLLVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGD
QLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCK
RAIRVHFRLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcggcggctgcggctggagaagggcagcggttcaagcggattccgcggcag
gcgtggtcggggaacctggagctggatccattgctcaatgaaaacttagagcagtggcca
catctaaatgaactggtacagtgctacaaggctgattttgtgaaggatgacggcaagtat
ggacgatacgagagtgttgcaccaccttctttccagaatcaaatttttgagggacctgat
actgacatagaaacagagttgcagcttggcaacgctaggcattccaagcctgaggatgct
actgaagatgatacgccaagcacctcagggaggcaaatatatgaaaccggatcatctgct
tcatcgtcaaaagtgcactgtagtctgtcaccactgccagcatatgagcctgcatttgat
tgggagaatgagagatctttgatatttggccaaagggtgccagaaagtctccctgcaatt
aacaacaggtttcttcatggcttgaagataactgtcaaggtactatctttgtcattccaa
gctggattagttgagcctttcagtggaacgatttgcttgtacaacagagatagaagggaa
aaactgtcagaagacttctattttcacatacttccaacagatatgcaggatgcccagatt
tccttggatcgtcgaggtgttttctcattggatgccccttcaccatcagtctgccttttg
attcaattagaaaaggctgctactgaagaagggggagtaacaccttctgtttattctcgt
aaagagcctgtgcacttaactgagaaagagaagcaaaaactgcaagtctggtctcgaatc
atgccttataaagagtcatttgcatgggctatgattcctctgtttgaaggtaaccatgct
ggtggtcttggtgatgctgcttctcctagcagtcctttagcaccgagtatatcaggatca
agttctcaagatagtattgtggaccctatttcaaagcttactttagacggaaaactcaac
cattactcaagtggaagctcagttattgtagagatatcaaacttaaacaaagtgaaggaa
agctatatagaggactccctccatgatccaaaacggaaagtacataaacctgtgaaaggt
gtattgagactagaagtggaaaaacttcacgacagccacaatgatgtggataatgtttct
gaaggcggaagcatggccaatgatttgaatgatgctggtgacctcaataatggcagatgc
agcaggagtagctttgatgggatccgcagttctttgaattctagtgctgttgcccagaaa
tatgctcatcacaatggtaaaatttctgatgcagataacggcgacaattttcaggctttt
gactttcggatgatgacccggagcgaaccattttcgcaactttttcattgcctctatgtg
tacccgttgactgttagcttgagccgcaaacgaaacctatttataagagtggaactgaga
aaggatgattctgacatccgtaagcctccattggaggctgttcatcctagggagcggaac
acaatgctacagaagtggggccatacacagattgctgttggaacaagaatggcttcgtac
catgatgaagttaaaatcagtctgcctgctcttttgacaccccaacatcatcttgtgttc
acttttttccatgtagatctccaaatgaaacttgaagcaccaaaaccagtgattgttggg
tattcagtacttccgctgtcgacacatattcagttactttcggatgtatccttgccaatt
ttgagagagctcgtcccacattacctgcaggaaagtggaaaggagagaatggactacctg
gaggatggaaaaactgttttcaggttgcgtttaaggctctgctcgtcattgtttccagtt
aatgaaaggataagagacttttttgtcgagtacgaccgccatactctacatacaagcccc
ccttggggttctgagcttcttgaggccataaatagtttgaagaacgtcgaatctacagca
ctgttacaatttctgcaacccatacttaatatgctgctccatcttattggtgatggcggt
gagacccttcaggttgctgcgtttcgggccatggttaacattttaacccgcagggtgcag
caggagtcaccagacggggctgagagaaataggtttcttattaactatgttgattttgct
ttcgatgactttggtgatcggcaagcacctgtgtatcctggtctatctactgtttgggga
agtcttgctcggagtaaggctaaaggttatagagttggtcctgtatacgatgatgtattg
gcaatggcttggttttttctggagcttattgtaaagtcaatgggattggaacaaagtcgt
ctcttctaccacaaccttccattaggtgaagatgttccaccgctacaattgaaagaaggt
gttttcaggtgcatcatgcaactttttgattgccttctaaccgaggttcatgagcgctgt
aaaaagggtttaagcttggcaaagcgcttgaacagcacgcttgctttcttttgctacgat
cttttatcaattattgagcctcgccaagtttttgagctggtttcgttgtatatggacaag
tttgccggagtttgtcagtcagtcctccatgactgcaaattgacattcctgcagataata
tgtgaccatgatctatttgttgagatgcctgggcgggacccctctgatagaaactatctc
tcgtcagttcttattcaagagatctttctcaccttggaccatgatgatttgtctcaacga
gcaaaggctgctcgaattttagtggtccttatatgcaagcatgaatttgatgcacgttat
caaaaaagtgaagacaagctgtacattgcacagttgtattttcctcttatagggcagatc
cttgatgagatgcctgttttctataatctgaatgccgttgaaaagcgtgaggtgctagtt
gtcattttgcaaatcataaggaacttggatgatgcaactcttatcaaagcatggcaacag
agcattgctcgaaccagattgttcttcaaacttcttgaagaatgcataagccattttgag
cacaacaaaacaggagacagcatgctacttggtgctagttctcggagccctgatgttgag
cgtcctgcgtccccaaagtactcggagcgattatccccatcagttaatgcatatttgtcg
gaggcatcaaggcatgaaataaggcctcagggaacaccagaaaatggatacatgtggaac
agggttagccctcagctaagttctccgaatcaaccctattcattgagggaagcactagct
caagcacaatcttcaagaattgggtcaacggcgagggcattgagagagtctctacatcca
gtactaagacaaaaattggaactttgggaagaaaatctcagcactgctgtgagcctggaa
gtgttgggaataactgagaagttttcagttgctgcgggcactcgtagcatcactactgat
tatgctaagttagattgtataacatcaatcttaatgggtcttttatctaggagccagccc
ttggccttttggaaagctttccttcctgtggtctataatatatttaatctccacggtgca
acacttatggcaagggagaatgaccgcttcttgaagcagattgcttttcatcttttgcgg
cttgctgttttccgaaatgattcgattagaaaaagggctgttgttgggctgcagattctt
gttaggaactcattcaactatttcaagaacactacaaggctgagggtcatgttgacaatt
actttatcagaattgatgtctgatgtgcaagtgactcagatgaaatccgatggttctctt
gaagaaagtggtgaaactcgtcgccttaggaaatcactggaggaaatggctgatgtgaga
agcaaggatctgttaaaagattgcggcctccctgttactgcattggaggctgctcctgaa
ggttcatctgataataggtggtcctgggtagaggtgaagcatctgtctaaatgtctagtc
caggcccttgatgctggtctggaacatgccctcttgggttctgtagtaactctggacagg
tatgcagctgccgagggtttctataagctagctatggcctatgcacctgttccagatctt
cacattatgtggttgctgcatctgtgtgatgcacaccaggagatgcaatcatgggctgaa
gcagcacaatgtgcagttgctgtagctggtgtgatcatgcaggcacttgttggaaggaat
gatgctgtgtggagcaaggagcatgttgcttcgctgcgtaagatttgccctattgtgagc
actgatgttagtgcagaagcctctgcagctgaagtcgagggatatggtgcatccaaacta
acagtggattcagctgtcaagtatcttcaacttgccaacaaactctttgcacaggctgaa
ctctaccatttttgtgcaagcatccaggaactcatcattcctgtgtataaaagcagaagg
tcttatggacagctggccaaatgccatacatcactcacaaacatctatgagtcaattctt
gaacaggaggccagtcctataccatttattgatgccacatactaccgagttggtttctat
ggtgagcgttttggcaagctcaacaaaaaggaatacgtgtttcgagagccgcgagatgta
cgtcttggtgacattatggagaagcttagtcatatatatgaggctaaaatggatggcaat
cacaccttacacatcattccagactcgagacaagtcaatgctgatgaattgcaacctggt
gtctgctatttacagatcactgctgttgatcctgtgatggaggatgaggacttgggtagc
aggagggaaaggattttttctttatctactggtactgtacgtgcacgtgtgtttgaccgt
tttctttttgacacaccattcacaaagaatggaaaaacacaaggtggcttagaagaccaa
tggaagagacgcacggtgcttcagacagagggttcatttcctgctttggtgaaccgcctg
ctagttaccaaatctgaatctctggaattctctcctgttgagaatgcgattggaatgatc
gaaacaagaacagctgcattgagaaatgaactagaggaaccacggagttctgaaggtgat
caactaccaaggcttcaaagcttgcaaaggatactccaaggaagtgtggctgttcaggtc
aacagtggagtgttaagtgtgtgcactgcattcttatccggtgagcctgcaaccaggctc
cgatcacaagaactgcagcagctcatcgctgcattgcttgaattcatggctgtctgcaag
cgcgcgatccgtgtgcatttcagattgataggcgaagaagaccaggaattccacacccaa
ctcgtcaatgggttccagtcactcactgctgagctatctcactatatccctgctatactt
tcagagctatga
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integrated database retrieval system
