Panicum hallii (Hall's panicgrass): 112874416
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Entry
112874416 CDS
T07366
Name
(RefSeq) THO complex subunit 7B-like isoform X1
KO
K13176
THO complex subunit 7
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
phai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112874416
09122 Translation
03013 Nucleocytoplasmic transport
112874416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112874416
03041 Spliceosome [BR:
phai03041
]
112874416
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112874416
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112874416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
YwqH-like
Phage_int_SAM_6
ADIP
Csd3_N
Motif
Other DBs
NCBI-GeneID:
112874416
NCBI-ProteinID:
XP_025793511
LinkDB
All DBs
Position
9:72836656..72839453
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AA seq
240 aa
AA seq
DB search
MLAKGRKVAGRGEEMSAHYAFGPQEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFATE
IEKDTDNISDCERLYKAFLQEINTFELPLLKSKAVVDANIREKESFNELQVEIERQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKLIYLQPPRSETEKLISDLEKEIADLEAENVA
CVRTLELRKKQFALLLHVVEELQISIEDEQKSIADELRAIAEEKMSIEESGSASDAMAVD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaaagggaggaaggtagctggaaggggtgaagaaatgtctgcacattatgca
tttggaccacaggaggatgatgcgatcattaagcacaggcttctaactaggacgacaact
accaggggtgaaccaccactaaagaagcttcagaagaagttcatgtcctttgccactgag
attgagaaggatacagataacataagcgactgcgagagactgtacaaggccttcctacag
gaaattaacacctttgaactacctcttctgaaaagcaaggctgttgttgatgcaaacatt
agggagaaggagagctttaatgagcttcaggttgagattgagcgacagatcttgcaagct
cagactgatattgaggatcttaagaagcaacttgagcagagcaagatcgagaggcagcac
aaggaggagtgtgaagcaatccggaagctgatatatttgcagcctccacggtcagaaact
gagaaactcatttcagatcttgagaaggagatagctgatttggaggctgagaatgtagcg
tgcgtaaggactttggaactacggaagaagcaatttgcccttcttctacatgtggttgag
gaattgcagatctcgattgaagatgagcaaaagagtatagcagatgagctgagagctatc
gctgaggagaagatgagcatagaagaaagcggcagtgcttctgatgccatggctgtagac
tga
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