Panicum hallii (Hall's panicgrass): 112874438
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Entry
112874438 CDS
T07366
Name
(RefSeq) phytochrome a
KO
K12120
phytochrome A
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112874438
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
HisKA
PAS_4
PAS_8
PAS_10
Motif
Other DBs
NCBI-GeneID:
112874438
NCBI-ProteinID:
XP_025793539
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Position
9:6451651..6458941
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AA seq
1130 aa
AA seq
DB search
MSSSRPTQCSSSSSRTRQNSRARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSGPPE
QQGRSEKVIAYLQHIQRGKLIQPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDD
PPKLGIGTNVRSLFTDPGATALQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLV
VDFEPVKPTEFPATAAGALQSYKLAAKAISKIQSLPGGSMEALCNTVVKEVFDLTGYDRV
MAYKFHEDEHGEVFAEITKPGIEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVK
ILEDEALSIDISLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNENEEDDEPNPEQPQQ
QQKKRLWGLLVCHHESPRYVPFPLRYACEFLAQVFAVHVNKEFELEKQIREKSILRMQTM
LSDMLFREASPLSIISGSPNIMDLVRCDGAALLYGDKVWRLQTAPTESQIRDIAFWLSEV
HRDSTGLSTDSLQDAGYPGAASLGDMICGMAVAKITSKDILFWFRSHTAAEIKWGGAKHD
PSDKDDNRRMHPRLSFKAFLEVVKMKSLPWNDYEMDAIHSLQLILRGTLNDATKPAQTSG
LDNQIGDLKLDGLAELQAVTSEMVRLMETATVPILAVDGNGLVNGWNQKVAELTGLRVDE
AIGRHILTLVEDSSVSTVQRMLYLALQGREEKEVRFELKTHGSKRDDGPVILVVNACASR
DLHDHVVGVCFVAQDMTVHKLVMDKFTRVEGDYKAIVHNPNPLIPPIFGADQFGWCSEWN
AAMTKLTGWHRDEVIDKMLLGEVFDSSNASCLLKNKDAFVRLCIIINSALAGDEAEKAPF
GFFDRNGKHIECLLSVNRKVNADGVVTGVFCFIHVPSDELQHALHVQQASEQTAVRRLKA
FSYMRHAINTPLSGMLYSREALKSTGLNEEQMRQVHVADSCHHQLNKILSDLDQDNITDK
SSCLDLDMAEFVLQDVVVAAVSQVLIGCQDKGIRVSCNLPERFMKQKVYGDGIRIQQILS
DFLFVSVKFSPVGGSVDISSKLTKNSIGESLHLIDLELRIKHQGTGVPAEILSQMYEEDN
KEQSEEGLSLLVSRNLLRLMNGDIRHLREAGMSTFILTVELASAPAAGGH
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcaaggcctactcagtgttccagttcatccagcaggactcgccagaactca
cgagcaaggatattagcacaaacaacccttgatgctgaactcaatgcagagtatgaagaa
tctggtgattcctttgattactccaagttggttgaagcgcagcggagtggcccacctgag
cagcaagggcgttcagagaaggtcatagcttacttgcagcacattcagagaggaaagcta
atccaaccatttggttgcttgttggcccttgatgagaagagcttcagggttattgcattc
agtgagaatgctccggaaatgcttacaacagtcagccatgctgtgcctaatgttgatgat
cccccaaagctaggaatcggtaccaatgtgcggtcccttttcactgacccaggtgccaca
gcactacaaaaggcactaggatttgctgacgtttctttgctgaatcctatcctagtccaa
tgcaagacctcaggcaagccattctatgccattgttcatagggcaactggttgtctggtg
gtagattttgagcctgtaaaacctacagaatttcctgccactgctgctggggctttgcag
tcttataagcttgctgctaaggcaatctccaaaattcagtcactaccaggtgggagcatg
gaggccttatgcaataccgtggttaaggaagtcttcgaccttacaggttacgacagggtg
atggcttacaagttccatgaagatgagcatggggaggtctttgcggagatcacaaaacct
ggtattgagccttatcttggccttcactatccggccactgatatccctcaagctgcaagg
ttccttttcatgaagaacaaagtacgaatgatctgtgattgtcgtgcaagatctgtgaag
attcttgaagatgaagcactctccattgatattagcttgtgtggttcaactcttagagca
ccacacagttgtcaccttcagtatatggagaacatgaactcaattgcatcccttgtcatg
gctgttgtggtcaatgaaaatgaagaggatgatgaacccaatcctgaacaaccacagcag
cagcagaagaagaggctgtggggtctccttgtttgtcatcatgagagccccagatatgtc
ccgtttccactgaggtatgcctgtgaattcttagcacaagtgtttgctgtccatgtaaac
aaggagtttgaattggagaagcagatacgagagaaaagcattctacgaatgcaaacaatg
ctctctgacatgctattcagggaagcatctcccttgagtatcatatctgggagtccaaat
atcatggacctagttagatgtgatggtgctgctcttttgtatggggacaaagtatggcgt
cttcaaacggctccaactgaatctcagatacgtgatattgccttctggctttcagaagtt
catagggattccactggcttgagtactgacagcctccaggatgctggatatccaggagct
gcctcccttggtgacatgatttgtggaatggcagtggctaagatcacttccaaggatatt
cttttctggttcaggtcacatacagctgctgaaattaaatggggaggtgcaaagcatgat
ccatctgacaaggacgacaacagaaggatgcacccaaggttgtccttcaaggcattcctt
gaggttgtcaagatgaagagtttgccatggaatgactacgagatggatgctattcactca
ttgcaacttatacttagaggtacgctgaatgatgccacaaagccggcccagacatctggt
ttagataaccagattggtgatctcaaacttgatgggcttgctgaattgcaggcagtgaca
agtgaaatggttcgcctgatggaaacagcaactgttccaatcttagcagtagatggcaat
ggattggtcaatgggtggaatcaaaaggtagcagaattgacaggattgagagttgatgag
gctataggaagacacatacttacacttgtggaagattcttctgtatcaactgttcagagg
atgctatacttggctctgcagggcagagaagagaaggaagttcgatttgagttgaaaaca
catggctccaagagggatgatggccctgttatcttggttgtaaatgcctgtgccagtcgt
gaccttcatgaccatgttgttggggtgtgctttgtagcccaggatatgactgttcataag
ttggtcatggacaaatttactcgtgttgaaggggactacaaggcaatcgttcataacccg
aacccactcattcctcccatatttggtgctgaccaatttgggtggtgctctgagtggaat
gcagcgatgaccaagcttaccgggtggcacagagatgaggtgattgataagatgctcctt
ggtgaggtttttgatagcagtaatgcttcctgccttttgaagaacaaagatgcatttgtg
cgtctttgcattatcatcaatagtgcattagccggtgacgaggcagaaaaggctccattt
ggcttcttcgatcgaaatgggaagcacattgagtgtcttctttcagtgaacagaaaagta
aatgcagatggtgttgtcactggagtgttctgtttcattcatgttcctagtgatgagctg
cagcatgcactacatgtgcagcaagcctcggaacaaacagcagtgagaaggctgaaggct
ttctcgtacatgcgacatgccatcaacacacctctctcaggtatgctttactctagggaa
gcactcaagagcacaggtctgaatgaagagcagatgaggcaggtccatgttgcagatagt
tgtcatcaccagctaaacaagatactttccgacttagatcaagataacattactgacaag
tcaagttgtttggatttggatatggctgaatttgtgttgcaagatgtggtggtggctgca
gtcagtcaagtactgataggttgccaggataaagggatcagagtttcttgcaacctgcca
gagagattcatgaagcaaaaagtgtacggggatggtattcgaatccagcagatcctctct
gacttcctatttgtttcggtgaagttctctcctgttggaggttctgttgatatctcttcc
aaactgactaagaacagcattggggaaagcctccatctcatagacctggagcttaggatc
aagcaccagggaacaggtgttccagcagaaatactatcacaaatgtacgaggaggacaat
aaggaacagtcagaagaggggttgagccttcttgtttctagaaaccttctgaggctcatg
aatggtgatattcgtcacctgagggaagctggcatgtcaaccttcatccttaccgtggaa
cttgcctctgctcctgccgccggtggacattga
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