Panicum hallii (Hall's panicgrass): 112874450
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Entry
112874450 CDS
T07366
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112874450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112874450
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112874450
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
ERCC3_RAD25_C
Herpesvir_UL11
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
112874450
NCBI-ProteinID:
XP_025793555
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Position
9:complement(70555394..70561442)
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AA seq
657 aa
AA seq
DB search
MSWMIFGWACQLHWRFQRSVKLNIVPIESNCEETEDACNHDFLLKDDLGIVCRICGLIQQ
RIENIFEHSWKKRTQSYRTYPAKHRKSSDPDPTENPLGTNLNVFPDALSIHPRHSQQMKP
HQVEGFNFLIKNLADENNPGGCILAHAPGSGKTFLLISFVHSFLARYPAGRPLIMLPKGI
LGTWKSEFLRWQVENIPLYDFYSSKANSQSEQRKILKLWEENRSILLLGYQQFAHIISDE
SSDRETVMCREKLLRVPSLVILDEGHTSRNDQTDLLSALETIQTPRKVVLTGTLFQNHXE
VFNILNLVRPKFLKMQRSRAIMKRILTKVDMLGTRVRSKTISEKVFYELIEENLQKDSET
VRVMIIRNLRELTENILHYYQGEILKELPGLVDFTVLLNMSTKQEDVIKGLVGLKRFEAH
AKCNAVSLHPCLKDVKNVDKKNRNICKRKMDSIVHGIDINDGVKAKFIYNLLSLSEAAGE
KVLVFSQYVRSLNFLETLFTKMKGWKAGVNTFLMDGGLTQEQREQAVERFNNSPEAKVFF
GSIKACGEGISLVGASRVVILDVHENPAVMRQAIGRAFRPGQSKMVYCYRLVAAGSSEEE
DHHTAFKKERVSKLWFEWDELCNNEDFELAKVDVSDCKDMFLESPAPQEDIKSLFKR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgagctggatgatctttggatgggcatgtcagttgcactggcgttttcagagatcagtc
aagttaaatatagttccaatagagagtaactgtgaggaaacagaggatgcatgtaaccat
gacttcttgttgaaagatgatttgggcattgtgtgccgtatttgtggtctgatccagcag
cgcatcgagaatatttttgagcattcatggaaaaagcgcacgcagtcatacagaacatac
ccagcaaaacacagaaagtctagtgatccagatccaactgagaatcctttaggtactaat
ctcaatgtgttccctgatgctctgtcaatccaccctcgacattcacaacagatgaaacct
caccaagtggaaggtttcaatttcttgatcaagaatctggcagatgagaacaatccagga
ggttgtattctagcacatgcgcctggctctggaaagacctttctgctgatcagttttgtc
cacagctttctggccaggtaccctgctgggaggccattgattatgcttccaaagggtatc
ttgggaacatggaaaagtgaatttctccgctggcaagttgagaacattcctttgtatgac
ttttactcctccaaagctaatagccagtctgagcagcgtaaaatattgaaattgtgggaa
gaaaacagaagtatattgctgcttggctatcagcaatttgcacacataatttctgatgaa
tcttctgatagagaaaccgtaatgtgcagagagaagctgctgagggtccctagccttgta
attctagatgaaggccacacctcgagaaacgaccaaacagacctgctcagtgcacttgaa
actatccaaactcctcgaaaagtggttctcacaggaaccttgtttcagaaccacngtgag
gttttcaatattttgaaccttgtacgaccgaaattcttgaagatgcagagatcccgtgca
atcatgaagcgtatactaactaaggtggacatgttagggacaagggtgcgatcgaaaacc
atctctgaaaaggttttctatgaattaattgaggagaaccttcagaaggattcggaaaca
gtgagagtgatgattatccgcaatctacgagagcttactgagaatatactccactattac
caaggtgagatcttgaaggagctacctggacttgtggatttcacagttttgctaaatatg
agtaccaaacaggaagatgtcatcaagggtttggtagggttgaaaagatttgaagcacat
gcaaaatgcaatgctgtttctcttcatccatgcctaaaggatgttaagaatgttgataag
aaaaataggaacatctgcaaaaggaagatggattccatcgtacacggaattgatatcaat
gatggggtgaaggcaaagttcatatacaatctgttgtctctttcagaagctgcaggggag
aaggtacttgtgttcagccagtatgtccgctctctaaatttcttggaaacgctgttcacc
aaaatgaaaggatggaaagcaggagttaacactttcttgatggatggtggtttaactcaa
gagcagcgagagcaagcagttgagagattcaacaactcacctgaagctaaagtcttcttt
ggttccatcaaagcgtgcggggaggggatctcccttgttggtgcatctcgtgtcgtcatt
ttggatgtccatgagaatcctgctgtgatgcggcaggcgattggacgggcattcagacca
ggccagtctaaaatggtgtactgctaccgcctcgtcgctgctggctcatcggaggaggag
gatcaccatacagcattcaagaaagagcgagtgtcaaagctgtggttcgagtgggatgag
ctttgcaacaacgaggattttgagctcgccaaggttgatgtttcagactgcaaggacatg
tttcttgaaagccctgcgccacaagaggacatcaaatccctgttcaagaggtga
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