Panicum hallii (Hall's panicgrass): 112874470
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Entry
112874470 CDS
T07366
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112874470
03015 mRNA surveillance pathway
112874470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112874470
03041 Spliceosome [BR:
phai03041
]
112874470
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112874470
Spliceosome [BR:
phai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
112874470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
PWI_CCDC43
Motif
Other DBs
NCBI-GeneID:
112874470
NCBI-ProteinID:
XP_025793584
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All DBs
Position
9:65698334..65706079
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AA seq
846 aa
AA seq
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MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPGLDHLVDMSKVKMDVMKPWIAKRVTELL
GFEDEVLINFIYGLLEEKEADGKKIQIQLTGFMEKNTVKFMKELWSLLLSAQQNASGVPQ
QFLDAKEAEIQQKKAEDDRIAQEIQKKREKEGRDLELEKQKRMDGDAGISRSSGDPTGSA
INNTIVNAEEDMELDFKRSSRTKNRGSRRSRSISSSPRGRRRSISPRKRSRSPSRRSRSI
DRQRGLSRRSTSPRRSASPRRHSPRRRSPYSRRGSPSLPRYPSPSSRWRSPLRRKSPSSG
SRRSPSPRHRRSPARASRRSPSPARRRSPVRRRFSPGRHRSPSPARRRPRSPSPGRRKPR
SPSLGRRRPRSPSPGRHRPRSPSPGMRRPRSPSPGSHMPRSPSPGRRRPWSRSPVKRRSP
SPKRRRRSPSPRTRYANRRPSPQRRRSISLYSSKSPNRSRRSLSIEAKRGMNGTPAIKVR
VVPERDQEQRSDDDNDRDGARIGDHRSPDSEHRLLKSLRSPNNEERNSTRDSSFRSPGKQ
LPTQDSTDTSGDEEEGSRARENARKANSARRKTKDSADRRLSKVGARASSPGEKSPFMLQ
SGKGVQKKHPDQLSESSEDELVGRRLKCRTDSPDERSPPRIEKDDLHLKDGRKSEHAMRG
SCDESVDAIEAKKFISEVIGDSQSEDGSPVKKPKKRTDIKSHIDSDSSGSEEPDKHRSHS
EKRRHKKAHKHKRRYDDSSESDTEPDGKEAKRRKEEKRLRKEERRRRREERHRRRAERHA
SKQKMKQTDTVALPPDSEKHRDSDSDVDVRKRGSPAGREESDQKKLEIELREKALESLRA
KKAINN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcttcttccgggggacgtccgctgaccaggacacgcgcttctccaacaag
caggcgaagctgctcaagacgcagaagttcgcacctgggcttgaccacctggtggacatg
tcaaaggtcaagatggatgtgatgaagccctggatcgccaagcgggtcactgagctcctc
gggttcgaggacgaagtgctcatcaacttcatctatgggctcctcgaagagaaggaggca
gatgggaagaagattcagatccagctgacagggttcatggagaagaacacagtgaagttc
atgaaagagctctggagcctcctcctaagtgcgcaacagaatgccagtggggtacctcaa
cagtttctagatgcaaaggaggctgaaatacagcagaaaaaggctgaggatgatagaatt
gcacaggagatccaaaagaagcgggagaaagagggaagagacttagaactggagaaacag
aaaaggatggatggggatgctggcatctcaagatcctctggtgatccaactggctctgct
ataaataatacaattgtcaatgctgaggaagacatggaattggacttcaagcgcagctca
agaacaaagaaccggggaagtcgcagatccaggagcatatcttcgtcgcctcgtggtagg
cgaagatctatttctcccagaaagcgttctcgatctccttctaggcgttcccgctctatt
gatagacagcgtggattatcacggcgttcaacttcacctagacgctctgcttctccccga
aggcattctccaagaaggagatcaccttattcaaggagagggtcaccttcattgccaagg
tatccatccccatcttcacgctggagatctcctcttcgcagaaaatcaccatcgtctggg
tcacgaaggtcaccttctcctcgccatcgtcgttcgccagctcgtgcgtcaaggaggtca
ccatctcctgcacgtcgaaggtctcctgtccgacgcaggttttcaccaggtagacatcga
tctccatctccagcaaggcgtaggccaagatccccatctccgggaaggcgcaagccacgg
tccccatccctaggaaggcgcagaccacggtcgccatctccaggaaggcacaggccacgg
tccccatctccaggaatgcgcaggccacggtccccatctcctggaagccacatgccacgc
tccccgtctcctggaagacgtaggccatggtcacgatctccagtaaaacgtcggtcccca
tctccaaaacgccggaggaggtccccatcaccaagaactcgttatgcaaatcgacgtccg
tctccacagcggagaaggagtatcagtctgtacagtagcaaaagtcctaatcgttctcgc
cggagtttgagtatagaggccaagagaggaatgaatggtacccccgccattaaagtcaga
gttgtgcctgaaagggaccaagaacaaagatcagatgatgataatgacagggatggtgca
aggattggtgatcatcgctccccagattctgaacataggttgttaaaatccttgaggtcg
cccaacaatgaagaaagaaactccacacgtgatagctctttcaggagcccagggaaacaa
ttacctactcaggacagcacagatacaagtggagatgaggaggaaggtagtcgtgctaga
gagaatgcacggaaagcaaattcagcacgtaggaaaactaaggattcagcagatcggcga
ctgagcaaagttggagctcgtgcctcaagccctggggaaaaatcaccattcatgttacaa
agtggcaagggtgtccagaaaaaacaccctgatcaactgtcagaatcatcagaagatgag
cttgttggtagaagattaaagtgcagaacagattctcctgatgagcgttccccaccaaga
attgaaaaggatgacttgcatttgaaggacgggaggaaaagtgagcatgccatgaggggt
tcatgtgatgaatctgttgatgctatcgaggcaaagaaatttatttctgaagtcattggg
gactcccaatcagaagatggaagtcctgtcaaaaagcccaagaaaagaacagatattaaa
agccacattgattctgatagttcagggtctgaagaacctgacaaacatagatcccattct
gagaagcgaaggcacaagaaggcccataagcataagagacgttatgatgatagttctgag
tctgataccgagccagatggcaaagaggcaaagaggaggaaggaagaaaagagactgaga
aaagaagaaagacgtcgaagacgtgaagagcggcatcgcagaagggcagaacgccatgcc
agcaaacaaaaaatgaagcagactgatactgttgcactgcctccagattctgagaagcat
cgggattctgattcagatgttgatgttaggaaaagaggttcccctgctggcagagaagag
tctgatcagaagaaacttgaaattgagcttcgtgagaaggcccttgagtctcttagagca
aagaaagccatcaacaactag
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