Panicum hallii (Hall's panicgrass): 112874480
Help
Entry
112874480 CDS
T07366
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112874480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112874480
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
112874480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_Gbeta
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_RIG_1st
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_DCAF4
KNTC1_N
Peptidase_M10_C
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_SCAP
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
112874480
NCBI-ProteinID:
XP_025793598
LinkDB
All DBs
Position
9:complement(72635044..72639325)
Genome browser
AA seq
521 aa
AA seq
DB search
MDHYHHFTPPPSPMENTAAGASSKPPTPASTPNSRLASGAPSSRHSATPSHASTTAFAPT
PASRTVYSDRFIPSRTGSNLALFDLAPSPSSSHDAAASGPASSSGSAPATSPYCALLRAA
LFGPDTPDRVASSATACSSSSSAGASALGTPATGNIFRFKAEVPRNAKRALFSGEDEEDA
LFPGIFTTRGAGPRKIPRSPYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNAC
SSKVTKLCDLGVDDNVCSVGWAQRGTHLAVGTNQGKVQIWDATRCKRIRTMESHRMRVGA
LAWSSSLLSSGSRDKSILHHDIRAQEDYVSKLTGHKSEVCGLKWSYDNRQLASGGNDNRL
FVWNPHSVQPVLKYTEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNTHLSCVD
TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQT
IVTGAGDETLRFWNVFPSPKSQSSDSLSCIGGTSFVRSYIR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaccactaccaccacttcacgccgccgccgtcgccgatggagaacacggcggcaggg
gcgtcctccaagccgccgacgccggcgtccacgcccaactcgcggctcgcctcgggcgcg
ccctcctcccggcactccgccacgccgtcgcacgcctccaccaccgcattcgcgcccacg
ccggcctcccggaccgtctacagcgaccgtttcatccccagccgcaccggatccaacctc
gcgctcttcgacctagccccctcgccctcgtcctcccacgacgccgcggccagcggcccg
gcctcctcgtccggatctgctcccgccacctcgccgtactgcgcgctcctccgcgccgcg
ctcttcggccccgacacgccggaccgggtcgcgtcctcggccaccgcctgctcctcctcc
tcgtccgcgggggcgtcggcgctgggcacccccgccacggggaatatcttcagattcaag
gcggaggtgccccggaacgccaagagggcgctattttccggcgaggacgaggaggacgcg
ctgtttcccggcattttcaccaccaggggcgccgggccaaggaagatcccaaggtcgccc
tacaaggtgctagatgcgcccgcgttgcaggacgacttctacctcaaccttgtcgattgg
tcttcacataatgtccttgctgttgggttgggcaattgcgtttacttgtggaatgcatgc
agtagcaaggtcaccaagctatgtgatttgggggtggatgacaatgtttgttctgtgggg
tgggcgcagcgtggcactcacctagctgtagggacaaatcaaggcaaagttcagatatgg
gatgcaactcgctgtaaaagaataagaacgatggaaagccatcgcatgcgtgtaggtgct
cttgcatggagttcttcattgctttcttctggaagtcgcgacaagagcatcctgcaccat
gacatccgtgctcaagaagattatgttagcaagcttaccgggcataaatctgaggtttgt
gggctcaagtggtcatatgacaatcgtcagcttgcatctggtggcaatgacaacagactt
tttgtttggaatccacattcagtacaaccagtactgaagtatacggagcacacagcagct
gtcaaagctattgcctggtcacctcatctccatggtctgcttgcatctggtggaggaacc
gcagatagatgcatacgattttggaatacgaccacaaatacacacttgagctgtgtggac
accggcagtcaggtctgcaatcttgtgtggtcaaagaatgtaaatgagcttgttagtacc
cacggatactctcaaaaccaaataattgtttggagatatccaacaatgtctaagcttgcc
actttgacaggacatacatacagagtattgtatctagctatttcccctgatggacagacc
atagttactggtgctggtgacgaaacactccggttttggaatgtgttcccctctccaaag
tcccagagttctgacagtttaagttgcatcggaggaacatcattcgttagaagctacatc
cggtga
DBGET
integrated database retrieval system