Panicum hallii (Hall's panicgrass): 112874668
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Entry
112874668 CDS
T07366
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
phai04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112874668
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112874668
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112874668
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112874668
03036 Chromosome and associated proteins [BR:
phai03036
]
112874668
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112874668
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112874668
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112874668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
112874668
NCBI-ProteinID:
XP_025793915
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All DBs
Position
9:8165435..8171146
Genome browser
AA seq
522 aa
AA seq
DB search
MFNKIIKRGNRKSARGDSAEPGARPAAPSSSSGGGGGGAGGAAPVTVNHASRASAATPSS
PTSPHVAPSALATNPAAGAASPPLLEPLPLLRDVAAADRPGLLLRKLRLVAAIFDLSDSL
KHPREKEAKRQALLELVDYVQAPAQAAGANAPARLPDHVQEALVAAISANIFRTLPPALH
ESAATIDPGATPDDEEEPYLDPAWPHLQLVYDLLLRYVVSPDTDTKVAKRYVDHAFVLRL
LDLFDSEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNVFYRFIFETQRHNGIGELLEI
LGSIINGFALPMKEEHKLFLARALIPLHKPKSVAIYHQQLSYCIVQFVEKDYKLADTVIR
GLLKYWPVTNCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGRCLNSSHFQVAERAL
FLWNNDHIVSLIAQNRGAIFPIIFEALERNIQSHWNQAVHGLTANVRKMFLDMDSELFEE
CQQQYMEKQAKAKEIQEQRESAWRQLEAVAAKAAGDDMVLVN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcatcaagcgggggaaccgcaagagcgcgcgcggggacagcgcggag
ccaggggcgcgccccgccgcgccctcgtcgtcctccgggggcggtggtggcggcgcgggg
ggagccgcgcccgtcaccgttaaccacgcctcccgggcctccgccgcgacgccgtcctcg
ccgacctcgccgcacgtggcgccgtccgcgctcgcgaccaaccccgcggcgggggctgcg
tcgccgccgctcctcgagccgctcccgctcctccgcgatgtcgccgccgccgaccgcccg
gggcttctcctccgcaagctccgcctcgtcgccgctatcttcgacctctcggactcgctc
aagcatccgcgggagaaggaggccaagcgccaggcgctcctcgagctcgtcgattacgtg
caggcccccgcgcaggccgcgggtgccaacgcgcccgcgcgcctcccggaccacgtccag
gaggcgctcgtcgccgccatctccgccaacatcttccgcacacttccgcctgcgctgcac
gagtccgctgcgacgatcgaccccggtgccacacctgatgacgaggaggagccctacctc
gaccccgcctggccgcacctccagctcgtctatgatctactgctccggtatgtcgtgtct
cctgacaccgacaccaaggttgccaagcggtacgtggaccatgccttcgtgctccgcctc
ctcgacctctttgactccgaggatccccgtgagcgtgagtacctcaagactgtgctccac
cgcatctatggcaagttcatggtacaccgcccattcatccgcaaggccatcaacaatgtg
ttctaccggttcatctttgagacgcagcgccacaatggcataggggagctccttgagatc
cttggaagcatcattaatggctttgccttgccaatgaaggaggagcacaagctgttcctt
gcccgtgctctcatccccctgcacaagcccaagtctgttgcaatctaccatcagcagcta
tcctactgtattgttcagttcgttgagaaggactacaaattagcagatactgtgatcagg
ggactgctcaaatactggccagtcacaaattgccagaaggaggtgttgtttctgggagag
ctagaagaagtgctcgaggcgacacagcctgcagagttccagcgttgcatggtgccactc
tttaagcagattggccggtgccttaacagttctcatttccaggttgctgagcgtgcattg
ttcttgtggaacaatgatcacattgtaagcttgatagcccaaaatcgtggtgctatattt
ccaatcatatttgaagcacttgagaggaatatacagagccactggaatcaagccgttcat
ggtctcactgcaaatgtgcgtaagatgtttttggatatggacagtgagctatttgaagag
tgccaacagcaatacatggagaaacaagcaaaagctaaagagatccaagagcaacgagaa
tctgcatggagacaattggaagctgttgctgccaaggctgctggagatgacatggttttg
gtcaactag
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