Panicum hallii (Hall's panicgrass): 112874728
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Entry
112874728 CDS
T07366
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112874728
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112874728
Factors involved in mRNA localization
Other mRNA localization factors
112874728
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
112874728
NCBI-ProteinID:
XP_025794012
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All DBs
Position
9:complement(71463203..71483991)
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AA seq
1290 aa
AA seq
DB search
MAIPVEEAIAALSTFSLEDEQPDVQGLAVLLSSERYATNSPIEYSDVAAYRLSLGEDTKA
INQLNTLIQEGKEMASLLYTYRSCVKALPQLPDSMKHSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERLVNGPTITHFWSMLKLLDVLLQLDHLKNAKASIPNDF
SWYKRTFTQVSSQWQDTDTMREELDDLQIFLSTRWAILLNLHAEMFRTNTVEDILQVLIV
FCVESLELDFALLFPERHTLLRVLPVLVVLATSSEKESESLYKRVKINRLLNIFKNDPVI
PAFPDLHLSPAAILKELSSYFQNFSSQTRLLSLPAPHEIPPRELQDYQRHYLILNHMGTI
RAEHDEFSVRFASAMNQMIMLKSSDGVDNDWSRDIKGNMYDIVVEGFQLLSRWTGRIWEQ
CAWKFSRPCKEPPISDSQQNITTFFDYEKVVRWNYTAEERRALLELIGYIKSIGLMMQHC
DTLVSEALWETIHMEVQDFVQDKLDTMLRTTFRKKKDLSRILSDMRTLSADWMANTSKAD
PEQHSLHQETEEMRQNTFYPRPVAPTAAQIHCLQFLICELVSGGNMRKPGGLFGNSGSGI
PVEDLKQLETFFYKLSFFLHILDYTATIGTLTDLGFLWFREFYLESSRVIQFPIECSLPW
MLVDHVIESQDAGLLESILIPFDLYNDSAQHALTCLKQRFLYDEIEAEVDLCFDLLAQKL
NEIIFTYYKSCAASTLLDSSFTYACDDGEKYFVKPLRFDAIFKLRRVMVLGRTIDLRSLI
THRMNKIFRENIDFLLERFENGDLCGVVELQQLLDILELTHQSISKFLELDSYCLMLSEM
QENLSLVSYSSRISSQIWSEMQTDFLPNFILCNTTQRFVRSIKGTHHSSHRSSASSGKPY
FYCGSHDLTMAYQGLAGLYRDFFGVPHMFAVVKLLGSRSLPAIIRALLDHISSKITGMVP
KITALQEALPKSIGLLSFDGGIAGCQKIIHEILTWEAKSEVKTEVLHDLKEIGSALYWMS
ILDIVLRQIDTTQFMQSAPWLGLVPGNDGQVKHAYSDSTPFTILLSSATNAVTSSPACPN
PSTFLVMSKQAEAASLLYKSNLNSGSVLEYALAFTSATLDRHYSKWSATPKTGFIDITTS
KDFYRIFSGLQYSYLEESITNPSKKQEMLGDSVAWAGCTIMYLLGQQQHFELFDFSYQFL
NVAEVESATVSHYQSSERTKSPNFLQGYEGILEAMRKARRLNNHVFSMLRARCPLEDKVA
CAIKPSGAPLHRMKFMNTVSAFETLPQRAT
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggccatccccgtggaggaggccatcgccgctctctccaccttctccctcgaggatgag
caaccagatgtgcaggggttagctgtgctcctgtctagtgaaagatatgcaactaacagt
cctattgagtacagcgatgttgctgcttatcgtctatcacttggagaagacacaaaagca
atcaaccagctgaatacgctgattcaagagggaaaagaaatggcttctttgctgtacaca
taccgtagctgtgtaaaagcactacctcagctgcctgattcaatgaagcatagccaagcc
gacttgtatctggaaacctatcaagttcttgacttggaaatgagtcgtttacgtgaaatt
cagagatggcaagcatcggctgcttctaagttggcagctgacatgcagagattctcaagg
ccagagagactggttaatggacccacaatcactcatttttggtctatgctgaagttgctt
gatgtcctactgcagcttgatcatctcaagaatgcaaaagccagcatacctaatgatttt
tcatggtacaagagaacatttactcaagtaagcagccagtggcaggatactgacaccatg
agagaagagctagatgatcttcagatttttctgagcaccagatgggccatcttgttaaac
ttgcatgctgagatgtttcggacgaataccgtagaggatatcctacaggttcttatagta
ttttgcgtggagtcattggagttggattttgctctccttttccctgagcgtcataccctg
cttcgtgtcctcccagttttggttgttctagcaacctcatcagagaaggagagtgagtca
ctttataagagggtgaagataaatcgtcttctcaacatttttaagaatgacccagttatc
ccagcatttccagatctgcatctctctcccgctgcaattttgaaggaattatcatcatat
tttcaaaatttttctagtcaaactcgtctccttagtcttccagcgcctcatgaaattcct
ccccgagagctacaagattatcagaggcattatttgattttgaatcacatgggaactatc
agagctgagcatgacgaattctctgtacgttttgcctctgctatgaatcagatgataatg
ctcaagtcatcagatggtgtagataatgactggtctagagatattaaagggaacatgtat
gatattgtggttgaaggcttccagcttcttagtcgttggactggcaggatttgggaacag
tgtgcttggaaattctctcgcccctgtaaagaaccacctatttcagattctcaacaaaac
atcacaacattttttgactatgaaaaggtagtacgttggaactatactgcggaagaacga
agggctctgcttgaattaattggttacataaagagtattggattgatgatgcaacattgt
gatactctagtttctgaagctttgtgggaaacaatacatatggaggtccaagattttgtg
caggataaactagatactatgcttcgtacaacatttagaaagaagaaggacctttctcgg
attctctctgatatgcgaaccctttcagcagattggatggccaacactagcaaggcagac
ccagagcagcactcgctacaccaagaaactgaggaaatgagacaaaacacattttaccct
agaccagttgcaccaacagctgcacagatccactgtttgcaatttcttatctgtgagctt
gtatctggtggtaatatgagaaaacctggaggactatttgggaatagtggctccggaata
cctgtggaggatcttaaacaactagagacatttttctacaaactcagttttttcttgcat
attttggattatacagcgactattggtactctaactgatcttgggtttctttggttcaga
gaattttacctggaatcttcccgtgtcattcagtttccaattgaatgctcgctcccatgg
atgctggtggaccatgtcattgaatcacaagatgctggtcttctcgaaagcattttgata
ccatttgacctttacaatgactctgctcaacatgcactaacttgtctcaagcagagattt
ctttatgatgaaatagaagctgaggttgatctttgtttcgatcttcttgctcagaagctt
aatgagataatatttacatattacaagagctgtgcagcaagtactcttcttgatagttca
tttacatacgcatgcgatgatggtgagaagtactttgtcaaacctttgcgatttgacgca
attttcaagttaagaagagtaatggttttggggaggacaattgacctaagaagcctaatt
actcacagaatgaacaaaatattccgggaaaatattgattttctacttgagcgctttgaa
aatggagatctatgtggtgttgtggaactgcaacaactgttggatattttggagcttaca
caccaatcaatatcaaaatttcttgaattggattcttactgccttatgcttagcgagatg
caagagaatctttcgctggtctcttattcaagtcgcatctcttctcagatatggagtgag
atgcagacagatttcttgcccaatttcatcttatgtaataccacacagcggtttgttaga
tccataaaaggaactcatcactcttctcatagatcaagtgcatctagtgggaagccctac
ttctattgtggatcacatgatttgaccatggcataccagggtcttgctgggttgtaccgt
gacttttttggagttcctcatatgtttgcagttgttaaactgcttggttccagatcattg
cctgcaatcatccgtgctttactggatcatatatcaagtaagattacaggtatggtgcca
aaaataactgcactgcaagaagcattgccaaaatctattggacttctttcatttgatggc
ggtatagcaggttgccagaaaataattcatgaaatattgacatgggaagcaaaatcagaa
gtgaaaactgaagttcttcatgatcttaaggaaattggaagtgctttgtactggatgagc
attctagacattgttttgagacaaatcgacactacacagttcatgcagtcagctccgtgg
ctgggactggttccaggaaatgatgggcaagtgaagcatgcctactctgatagtactcca
tttaccatacttttgagttcggccaccaatgctgtcacatcaagccctgcatgcccaaat
ccatctacatttcttgtgatgtcaaagcaagctgaagctgccagtctactgtataaatca
aatctcaactctggtagtgtgctggagtatgctcttgctttcacaagtgctaccctggat
agacactacagcaaatggagtgcaactccaaagacaggttttattgacataacgacttcg
aaggacttctatcgcatttttagtggtcttcagtatagttacttagaagagagcattacc
aatccttcaaagaaacaagaaatgctgggtgattctgtagcatgggctggttgtacgatc
atgtacttactgggacagcagcagcacttcgagctttttgatttctcctatcaatttctc
aacgtggcagaagtagaaagcgcgacagtttcacactatcaatcttcagagaggactaaa
agtccaaatttcttgcaaggctatgagggcatccttgaagcgatgaggaaggccaggagg
ctcaataaccatgttttctccatgttgagggcacgctgccccctcgaggacaaggttgcg
tgtgccatcaagccaagtggggcacctcttcaccgtatgaagtttatgaacacagtttct
gcattcgagacattgccacaaagagccacctga
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