Panicum hallii (Hall's panicgrass): 112874744
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Entry
112874744 CDS
T07366
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112874744
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112874744
04147 Exosome [BR:
phai04147
]
112874744
04090 CD molecules [BR:
phai04090
]
112874744
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112874744
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112874744
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112874744
CD molecules [BR:
phai04090
]
Proteins
112874744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
AAA_22
ABC_ATPase
AAA_21
AAA_30
Zeta_toxin
AAA_15
DUF815
AAA_23
Motif
Other DBs
NCBI-GeneID:
112874744
NCBI-ProteinID:
XP_025794077
LinkDB
All DBs
Position
1:complement(4614505..4620386)
Genome browser
AA seq
1245 aa
AA seq
DB search
MGKDGPPETVETKKAAPMLRSFASVFMHADAVDVALMVLGLVGAMGDGMSTPITMLIASR
IFNDVGSSPDRLKQFRSRMNENARNLLILAAANWTMAFLEGYCWTRTAERQSSRMRARYL
SAVLRQDVEYFDLRASSTSEVIASVSSDSLAVQDALSEKVPNFVVNTTMFVGSYAVGFAL
LWRLTLVGLPSSLLLVVPGFLYGRILIGLARRIREQYTRPGAIAEQAMSSVRTVYSFVAE
GSTAARFSAALEESARLGIKQGLAKGVALGSEGIAFAIFAFNIWYGTRLIMSHGYKGGAV
YAASASIVIGGSALGLGLSNIKYFAEASVAAERMLEVIRRVPKIDSESNAGEELARVAGE
VEFKDVEFCYPSRPENPIFKSFSLRVPAGHTVALVGSSGSGKSTAIALVERFYDPSEGQV
SLDGVDIRRLRLKWLRAQMGLVSQEPALFATSIRENILFGKEDATEEEVVAAAKVANAHN
FISQLPQGYHTQVGEHGVQMSGGQKQRIAIARAIIKSPKILLLDEATSALDTNSERVVQE
ALELASMGRTTIVIAHRLSTIQNANTIAVMQSGEVKELGSHDELIANENGLYSSLVHLQQ
TKESMDSEEVDGTRSTSLMRQSSSHGMSKRLSTASGSITTLSIMGNDEGNGNNTELKLPV
PSFRRLLMLNAPEWKQALMGSFSAVVVGGIQPVYAYAMGSMVSIYFLTDHKEMKDQTRIY
SLFFVGLALVSFLINIAQHYNFGVMGEYLTKRIREQMISKILTFEIGWFDSDENSSGAIC
AQLAQNANVVRSLVGDRMSLVIQTASAVLIACIMSLAIAWRLALVMIVVQPLIIICFYAR
RTLLKSMSKKSLQAQSECSKLAVEAVANLRTVTAFSSQDRILRLFDQAQEGPRKESIRQS
WFAGLGLSISMSILRCVWALTFWYGGVLMAQHRLTSKALFQTFLILISTGRVIADAGSMT
TDLAKGADAVTSVFSIIDRKTEIDPDNPEGYKPKNLEGKVDITEIDFAYPSRPDVIIFKG
FSLSIQPGKSTALVGQSGSGKSTIIGLIERFYDPLVGTIEIDGIGIKTYSLRALRKHIGL
VSQEPTIFAGTIRENIVYGTETATEEETQSAARSANAHDFISSLKDGYDTWCGERGVQLS
GGQKQRIAIARAILKQPAILLLDEATSALDSQSEKVVQEALDRVMVGRTSVVVAHRLSTI
QNCDLITVLEKGIVVEKGTHASLMAKGPSGTYFGLVNLQQGGSHH
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacgggccaccggagacggtggagaccaagaaggcggcgccgatgctgcgg
tcgttcgcgtcagtgttcatgcacgcggacgccgtggacgtcgcgctcatggtgctgggc
ctggtgggcgccatgggcgacggcatgtcgacgccgataacgatgcttatcgccagccgc
atattcaacgacgtcggcagcagccctgaccggctcaagcaatttcgttccaggatgaac
gagaacgcaagaaatctcctcatcttggcagccgccaactggaccatggcgttcctggag
gggtattgctggacgcggacggcggagcggcagtcgtcgcggatgcgggcgcggtacctg
agcgcggtgctccggcaggacgtggagtacttcgacctcagggcgagctccacgtcggag
gtgatcgccagcgtctccagcgacagcctcgccgtgcaggacgcgctgagcgagaaggtg
cccaacttcgtggtgaacaccaccatgttcgtcggcagctacgccgtcggcttcgcgctg
ctgtggcggctcacgctggtggggctgccgtcctcgctgctgctcgtcgtccccggcttc
ctctacggccgcatcctcatcggcctcgcgcgccggatcagggagcagtacacgcgcccg
ggtgccatcgccgagcaggccatgtcgtcggtgcgcaccgtgtactcgttcgtggcggag
ggcagcacagcggcgcggttctccgccgccctcgaggagtcggcgcggctcgggatcaag
caggggctcgccaagggagtcgccctcggaagcgaaggcatcgccttcgcgatcttcgcc
ttcaatatctggtacggcacccgcctcatcatgtcccacggctacaagggcggcgccgtc
tacgccgcctccgccagcatcgtcatcggaggctcagcgctggggttggggctgtcgaac
atcaagtacttcgcggaggcaagcgtggcggcggagaggatgctggaggtgatccggcgg
gtgcccaagatcgactcggagagcaacgccggcgaggagctggccagggtcgccggcgag
gtggaatttaaggacgtggagttctgctacccgtcgcgacccgagaaccccatcttcaag
agcttcagcctgcgcgtgccagcggggcacacagtggcgcttgtggggagcagcgggtca
gggaagtcgacggcgatcgcgctggtggagcggttttatgatccgtcggaggggcaggtg
agcctggacggcgtggacatccggcggctgcggctcaagtggctgcgcgcgcagatgggg
ctggtcagccaggagccagcgctgttcgcgacgtccattagggagaacatcctgttcggc
aaggaggacgcgacggaggaggaggtcgtcgccgcggcgaaggtggccaatgcccacaac
ttcatctcccagctgccgcagggctaccacacgcaggtgggtgagcatggtgtccaaatg
tctggaggacagaagcaaaggattgctattgctagagcaatcataaagtcacctaagatc
cttctccttgatgaagccaccagtgcattggacaccaattcagagcgtgttgtgcaggag
gcgcttgaactggcctccatgggtcgaacaactattgtcattgcccatcggctatccacc
atccaaaacgcaaatacgattgcggtcatgcagtctggtgaggtcaaggagctgggatcc
catgatgagctcattgccaatgagaatggcctctactcatctcttgtccaccttcaacag
accaaagagtcaatggattctgaagaggttgatggaactagaagtacatctcttatgcgg
caatcaagcagccatggtatgagcaagaggttatccacagcaagcgggtcaatcacaaca
ctatccatcatgggcaatgatgaaggtaacggcaacaacacagagctgaagcttcctgtg
ccatccttcagaaggctattgatgcttaatgcaccagagtggaagcaagcactgatggga
agcttcagtgcagttgtggtcggaggcatacaacctgtgtatgcatacgccatgggcagc
atggtctcgatctacttcttgacagatcataaagagatgaaggatcaaaccagaatctac
tcactgttcttcgttggccttgcactggtctcattcctgatcaacattgcgcaacattac
aactttggtgtcatgggggaatacctcaccaaaaggataagagaacagatgatttcaaaa
attcttacttttgagattgggtggttcgacagtgatgagaactctagtggcgccatatgc
gcacagcttgcccagaatgccaacgttgtgagatcactcgttggtgatcgaatgtccctc
gtcatccaaacagcttctgcagtgctcattgcctgcatcatgagtctagcaatcgcttgg
cgtttggcacttgtgatgatcgtagtgcaaccacttatcatcatttgcttttatgctcgt
cgtaccttactaaagagcatgtccaagaaatcattacaagcacaatctgaatgtagcaag
ctagctgttgaggcagttgctaatcttcgcacagtaactgctttctcatcccaagaccgc
atcctacgcctctttgaccaagcacaggaaggcccacgcaaggaaagtatcaggcagtcc
tggtttgctggtctggggctcagtatctccatgagcattttgagatgcgtatgggccctc
accttttggtatggtggagtactcatggctcagcaccgccttacttccaaggccctattt
cagaccttcttgattttgataagcacaggacgtgtgatagcagatgcaggtagcatgaca
acagaccttgccaagggtgctgatgcagtcacttcagttttttctattattgacaggaag
acagaaattgaccctgacaaccctgaaggatacaaaccaaagaatcttgaaggcaaggtg
gacattacagaaattgattttgcatatccgtcaaggccagatgtgatcatcttcaaagga
ttctccttgagcatccagccaggtaagtcaacagctcttgttgggcaaagtggttctggc
aagtcaaccatcattggactcatcgagcggttctacgatccccttgttgggacaatagag
atcgatggcataggcatcaaaacatatagcctacgagccctacgaaagcacattggactg
gttagccaagaaccaacaatttttgcaggtaccatcagagagaacattgtatatggcact
gaaacagccactgaggaagagactcagagtgctgcgaggtctgcgaatgcacatgacttc
attagcagcctcaaggatggatacgacacgtggtgtggtgagcggggtgttcagttatca
ggaggtcaaaagcagcggattgcaattgcccgtgctatcctgaagcaacctgctatcttg
ctactagatgaagctacaagtgcactggacagccagtctgagaaggtggtgcaagaggca
ttggaccgggtgatggtaggcaggacaagtgttgtggttgcgcacagactcagcacaatc
cagaactgtgacctaatcaccgtgcttgagaaaggaatagtcgtggagaagggcacacat
gcatcccttatggccaagggtccttctggaacatactttggattggtcaatttgcaacaa
ggaggcagccatcactaa
DBGET
integrated database retrieval system
