Panicum hallii (Hall's panicgrass): 112874817
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Entry
112874817 CDS
T07366
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phai03041
]
112874817
Spliceosome [BR:
phai03041
]
Common components
Common spliceosomal components
General mRNP proteins
112874817
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
DUF3280
RRM_8
Motif
Other DBs
NCBI-GeneID:
112874817
NCBI-ProteinID:
XP_025794148
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Position
9:complement(16036527..16042977)
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AA seq
542 aa
AA seq
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MEFDEYEYLEKAVDPAAPPANGSGSGEKDRGSRRREGGEDRVSKRPRSGEDRDRDRERHR
SSREHRDRERDRDDGKDKEKSRDSRGKDRDREGRDREKERGDKHRPREREVERERRSRSR
SERRRAEEEEMVKELERERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSL
KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQA
VMVKPSEAEKNLVQSNATSGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP
LDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDHVGVQVSGATTGDL
DDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVAIPGPAASVIGAPAVASLVP
PAIPAVGSVPGAPVLPITTQSAIMSTPTEFLLLKNMFDPTVETDPDFDLDIRDDVQDECS
KFGAVKHIFVDKHTAGFVYLQFDSVTAAAKAQQALHGRWFAGKMITATFMSAQEYNAKFP
NL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgatgagtacgagtaccttgagaaggcggtggatcccgccgccccgccggcc
aacggctccggctccggcgagaaggaccgcggttcgcgccgccgcgagggcggcgaggac
cgcgtatcgaagcgcccccgctccggggaggaccgcgaccgcgaccgggagcggcaccgc
agcagccgcgagcaccgcgaccgggaacgggaccgggatgacggcaaggataaggagaag
agccgcgacagccgcgggaaggacagggaccgtgaggggagggaccgggagaaggagagg
ggggacaagcaccgacccagggagagggaagtggaacgggagcggaggagccggagccgt
tcggagcggcgccgcgccgaggaggaggagatggtaaaggagctggagcgggagcgggag
cgcagcgagcgccaccactaccgcgaccgtgatgtcagacgtaggaaagatgatggtgca
gaaccagaagttgatccagaaagggaccagaggactgtatttgccttccagctatcattg
aaggcagacgaaagagatgtttatgagttcttctcaagggctggaaaggttcgtgatgtt
cgccttattatggatcgaaactcacggcgttctaaaggagttgggtacattgagttttac
gatgttatgtctgttcccatggcaattgctctgtctggtcaaccgcttcttggacaagca
gtgatggttaagccatctgaggctgaaaagaacttagttcagtccaatgcgacatctggt
ggtgcagcttcaggtggagcaagaaagttgtatgttggtaatcttcactctaatatcact
gaagaccaattgagacaggtatttgaaccatttgggcaagtggagcttgtacagctgccc
ctagatccaatgactggactttgcaaaggttatggtttcattcagtttgcacggcttgaa
gatgcaaaagctgcacaaagcttgaatgggcagcttgatatcgctggcagagttattaag
gtttcagctgttactgatcatgtgggggtccaagttagtggagcaactactggagattta
gatgatgatgaaggtggaggcttggcattaaatgcaagctccagagctgctcttatgctc
aaattggacaggagtggcactgcaacaagcttaactggtggtattggtgctgctggagtg
gctataccagggccagctgcatcagttattggggctccagcagttgcttctcttgtacca
ccagcaattcctgctgttggatcagttcctggggcacctgtgcttcctatcaccactcaa
tctgcaatcatgtctacacctacagaattcttattgcttaagaacatgtttgaccccacg
gtggagacagatcctgattttgatttggatattagagatgatgtccaagatgaatgttcc
aagtttggtgcagtgaagcacatttttgttgacaaacatactgcaggctttgtgtatctg
cagtttgatagtgtaacggcagcagcaaaggcccaacaagcacttcatggaagatggttc
gctgggaaaatgattacagcaacatttatgtctgcgcaggaatataatgccaagttccca
aacttgtga
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