Panicum hallii (Hall's panicgrass): 112874841
Help
Entry
112874841 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112874841
04121 Ubiquitin system [BR:
phai04121
]
112874841
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112874841
Membrane trafficking [BR:
phai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112874841
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112874841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
Prok-RING_1
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_16
FAR1_N
zf-RING-like
DUF7129
HypA
zf-WRNIP1_ubi
zf-RING_Vps41
zf-Nse
zf_RING_Vps8_fungal
RH_dom
Rad50_zn_hook
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
112874841
NCBI-ProteinID:
XP_025794185
LinkDB
All DBs
Position
9:complement(65664867..65666187)
Genome browser
AA seq
278 aa
AA seq
DB search
MESSPVSYWCYRCSRFVRVSPDTVVCPECDGGFLEQFPQQPPRGGGGSGRRGTMNPVIVL
RGGSLSGFELYYDDGAGDGLRPLPGDVQHLLMGSGFHRLLDQFSRLEAAAPRPPASKAAV
ESMPSVTISGSGAHCAVCQEAFEPGAAGREMPCKHVYHQDCILPWLSLRNSCPVCRQELP
AAATPDAEADAGLTIWRLPRGGFAVGRFAGGPREQLPVVYTELDGGFSNGVGPRRVTWPE
GEGQVDGGEGRIRRVFRNLFGCFGHGSRQASSSQSRSG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtctccggtgtcctactggtgctaccgctgcagccgcttcgtgagggtgtct
ccggacaccgtcgtctgcccggagtgcgacggcggcttcctggagcagttcccacagcag
ccgccgcggggcggcggcgggagcggccggcgcgggacgatgaacccggtcatcgtgctc
cggggcggatcgctatccgggttcgagctctactacgacgacggcgcgggcgacgggctg
cggccgctgcccggtgacgtccagcacctcctcatggggtccggtttccaccgcctgctg
gaccagttctcgcggctggaggcggcggcgccgcggccgccggcgtctaaggctgcggtg
gagtccatgccgtccgtgacgatttccggaagcggggctcactgcgcggtgtgccaggag
gcctttgagcccggcgccgccgggcgggagatgccgtgcaaacatgtctaccaccaagac
tgcatcttgccatggctgtccctccgcaactcatgccccgtttgtcgtcaagagcttccg
gccgcagccaccccagatgcggaggcggatgctgggctcaccatctggcgacttccacgc
ggtggatttgccgtagggaggtttgccggcgggcccagagagcagctcccggtcgtctac
accgagctggatgggggcttcagtaacggggtcggcccgaggagggtgacatggccagag
ggagaagggcaagtggacggcggtgaaggtcggattcgccgtgtatttaggaatctgttt
ggctgctttggtcatggcagccggcaagcaagttcgtcgcaatctcgtagtggctga
DBGET
integrated database retrieval system
