Panicum hallii (Hall's panicgrass): 112874847
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Entry
112874847 CDS
T07366
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112874847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112874847
03036 Chromosome and associated proteins [BR:
phai03036
]
112874847
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112874847
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112874847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
112874847
NCBI-ProteinID:
XP_025794191
LinkDB
All DBs
Position
9:complement(67739882..67747654)
Genome browser
AA seq
1293 aa
AA seq
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MFSPAIRKPHLLHRRDREEASPSPPPAAPAHSPSPRGFAISDRPATGTPAPWTSSSLLAR
ISTSKRTDRVGDSDQIQPVHVAEFPQVVRNAQASLLQKNFSGKSMFAGGIDKETSLAWMI
CGNELFFWNYSASVAKDCLVLDVPSSLIGYKDVKSLSGIQWAVCIMRWHSSGASTRNSGE
ILYRKSSTGVILCNKRTQAVAYWPDIYAEFNKSLILSSPGYGEVSASDGASDRFRFNSII
AAAVPGGTHECIAIASEPTGALWLFQCSPEGIRRKKVHGDTLGDGGADHSQKSNGGRSLA
WLPNYVSSEGSDRKFFLLTNNEVQCWSISLLHDIDIKKLGSQEIVGTDGDVSIKKDIAGQ
KNVWLLDMQIDERGKEFSILVATFCKDRVSGSNYTQYSLLTMLYKPNQKFSSEDNAVKVE
RFLEKKAPSQVIIPKARVEDEEFLFSMRLKTGGKPSGSVIILSGDGTATVAIYWRGSTRL
YQFDLPWDAGKVLDASVIPSADDRDEGAWVVLTEKAGVWAIPEKAVLVGGVEPPERSLSR
KGSCNEAVAEEKRRTQVLSAGVVPRRVSSEAWSAGERQRPTLTGIAQQAVVDEESEILLN
RLFHDFIISGAVNEALQKLRAAGAFDKEGEMNIFVRMSKSIVNTLAKHWTTTREAEFLAS
TIVSSLVEKQQKHEKFLQFLVLSKCHEELASKQRAAMLIIMEHGEKLSGMIQLRELHNTL
IQQRSSTHLSPQLKTQITGALWNLIQLVGEKARRNTVLLMDRDNAEVFYSRVSEIEDLFY
CLSHQLQYIISREEHPSVQMQRALELANACITLVHAALHYRKEHKEWYPSPEGLITWNSH
PVVRSGIWSLATFVMELLGESGAADMSMKFNLWSQLEGLTDILLEAYIGLLTAKFERGDE
HGALVQEYCERRDELLGSLYNVAKQIVEDKYQESRDGTDNLDLKESIFRDVSSPILATAK
RHEGYQTLWQICSDLNDSVLLRSLMHDSVGPHGGFSFFVFKELVNRRQYSKLLRLGEEFQ
EELASFLKDRSDLLWLHEICLNQFSSASETLHTYALHGSPDEDASVTTSRKPLSFAERRR
LLYLSKIAATAGKDIDYEAKVARIEADLRILKLQEEIVQHDPEYAQVKYTTTLLDPSELI
DMCLKRDQELSLKAFEVFASTSSSFRSSNRGLLEACWMNATNQDDWVKLSEASMSEGWSD
EVIQESLQGTVLFKASRLCYSPDSVVYDGTFEDVLPVKKEDVHPRGLESKCLSVEEVLMQ
HKDFPDAGKLMMTAVIMGKELSYTAAEPVEMDS
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgccggcgatcaggaagccccacctcctccaccgcagggacagggaggaggca
tccccttcacctccacctgctgctcccgcccactccccatcgcctcgcggattcgccatc
tccgaccgccctgctaccggcaccccggccccatggacctcctcctctctcctcgctagg
atttcaacatcgaagcgaactgacagggttggtgactcggaccagatccaaccggtgcac
gtagcagagtttccccaagtcgttcggaatgcccaagccagccttctacagaaaaatttc
tctggcaagagcatgtttgctggtggcattgataaagaaacatcccttgcgtggatgata
tgcggaaatgagctttttttctggaactactcagcttctgttgctaaagactgtctagta
cttgatgttccatcttctcttattggatacaaagacgtgaaatccctctccggtattcag
tgggcagtttgtataatgagatggcatagtagcggtgcatcaacaagaaacagtggagag
atattgtatagaaaaagttctactggtgttatcctctgcaacaaaagaacacaagcagtt
gcttattggcctgacatctatgctgaatttaataagagtctaattcttagctcaccgggt
tatggtgaggtgtctgcaagtgatggtgcatctgatcgtttcaggtttaattcaattatt
gcagctgcagttccaggaggcactcatgagtgtattgcaatagcttctgagcctaccggt
gctttgtggttgttccagtgttcaccagaaggaattcgtcgaaaaaaagtccacggagat
acattaggagatggtggtgccgatcattctcagaaaagtaatggtggaaggtcattggct
tggctaccaaattatgtctcatctgagggttctgatcggaagttctttttgttgacaaac
aatgaggtgcaatgttggagtatctcgctcttgcatgacattgatataaaaaaattaggg
tctcaggaaattgttggtactgatggggatgtgagcataaagaaagatatagctgggcag
aaaaatgtatggcttttggacatgcagatagatgagcgtgggaaggaatttagcattctt
gttgctacattttgcaaagatagggttagtgggtcaaactacactcagtattcacttcta
acgatgctgtacaaacctaaccagaagttctcatctgaagataatgctgttaaagttgaa
agatttttggagaaaaaagctccttctcaggtgattattcctaaggctagagtagaggat
gaagaattcttgttctcaatgaggctaaaaactggtggtaagccttctggttctgtaatc
atcctgtcaggtgatggaacagcaacagtggccatatattggagaggttccacccgactt
tatcagtttgatctgccctgggatgctggaaaggtcctagatgcttccgttatcccatca
gctgatgacagagatgaaggtgcttgggttgttctaacagaaaaggcaggagtctgggcg
attcctgaaaaggctgtattagttggtggggtcgaaccaccagagcgcagcttgtcacga
aaaggtagttgtaatgaagcagttgctgaggagaaaagaagaactcaagtcctcagtgcc
ggtgttgttcccaggagagttagttctgaggcatggagtgctggtgagaggcaaaggccc
acattaactggcatagctcagcaggctgtggttgatgaagagtcggaaatactactgaat
cggctatttcatgatttcataatctctggtgcagttaatgaggcacttcaaaagcttaga
gccgcaggagcatttgacaaagagggtgagatgaacatatttgttcggatgagcaaatcc
attgtaaacacactagctaaacactggacaacaaccagagaagctgaatttcttgcctca
acaattgtttcatcccttgttgagaagcagcaaaaacatgaaaaattcctccagtttctt
gtcttgtcaaagtgtcatgaagaactcgcttcaaagcaaagagctgcaatgctaatcatc
atggagcatggtgaaaaactttctggaatgattcagcttagggaattacataatactctt
atccagcaacgctcaagtactcatttatcacctcagttaaaaacccaaatcactggtgcc
ctatggaaccttattcagttggttggtgagaaagctcgaagaaacacagttctcttaatg
gaccgcgataatgcagaagtgttctacagtagagtttctgagatagaggatctattttat
tgcttatctcatcagcttcaatacatcattagtagagaagaacacccttctgttcagatg
caacgtgcacttgaattagcaaatgcttgcatcaccttagttcatgcagcattgcactac
aggaaggagcacaaggagtggtatccttctcctgaaggactgataacatggaacagccac
cctgtcgtacggtctggaatctggagtttggcaacatttgttatggagcttttgggagaa
tcaggagctgcagacatgtcaatgaaatttaatctatggtctcagctggagggactcaca
gatattctactggaggcatatataggtcttttaactgccaagtttgaacgtggggatgaa
catggcgcgctagtccaagaatattgtgagcgaagagatgaacttctcggatccctctac
aacgttgctaaacaaatagtggaggacaaataccaggagtcaagagatggtacagacaat
ctggatctgaaagaatctatatttagagatgttagttctccaattttggcaacagcaaaa
cggcatgaaggttaccaaacactgtggcagatctgctctgacctcaatgattcagttctc
ctccgtagcctaatgcatgacagtgtagggcctcatgggggattcagtttctttgttttt
aaagagctagtcaacagaagacaatactctaagctgttaaggctgggtgaagaattccag
gaagagctagctagttttctgaaagaccggagtgatcttctgtggcttcatgagatatgc
ttaaatcagttctcatctgcttctgagactcttcatacctatgcgctgcatggtagtcct
gatgaagatgctagtgtcacaaccagcagaaagccactgtcctttgctgaaagaagacgt
cttctttatctctctaaaattgctgcaacagcaggtaaggatattgactatgaagcgaag
gttgcacggatagaagcagacttgcggattctaaaacttcaggaagaaattgttcagcat
gatccagaatatgctcaagtcaaatatacaacgacattgcttgatccatcagaactgatt
gacatgtgcctgaagagagaccaagagctctcccttaaagcttttgaagtatttgcttcg
acaagctcatcgttccgaagctccaacagaggccttcttgaggcatgctggatgaatgca
accaaccaggatgattgggtgaagctttcggaggcatccatgtcggaaggttggagcgac
gaagtcatacaagaatctcttcaaggaactgtcctcttcaaagcttccaggctgtgttat
agcccggattctgtggtgtatgatggcacttttgaagatgttctgcctgtgaagaaagag
gatgtacatccgaggggtttggagagcaaatgcttgtcagtggaggaagtactgatgcag
cacaaggattttcctgatgctggtaagttgatgatgactgcagtgattatgggcaaggag
ctatcatatacagctgcagaacctgtggagatggactcatga
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