Panicum hallii (Hall's panicgrass): 112874895
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Entry
112874895 CDS
T07366
Name
(RefSeq) probable E3 ubiquitin-protein ligase XBOS33
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112874895
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112874895
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112874895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
RING_XB3-XBAT31
Ank_KRIT1
zf-C3HC4
zf-RING_2
ANK_LRRK2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
112874895
NCBI-ProteinID:
XP_025794250
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All DBs
Position
9:58108494..58112324
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AA seq
518 aa
AA seq
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MGNSLGCSASGERLVSAARDGDAIEARMLLELSPALARYSTFGGLNTPLHFAAAKGHLDI
VTMLLEKGADVNARNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLNGRTALHFAA
HDGFVRCVRLLLADFVPSVALEDIATSVVDGDCQTNSGSSPNSSLGQKFNEPARVRYINK
PADGGVTALHMAAVNGHLDCMQLLIDLGANVSAVTFPYGTTANLIGAGSTPLHYAAGGGK
LECCELLISKGASRLTLNCNGWLPMDVARIFGRRSLEPLLSPNSHSSVPVFQPSSYLALP
LMSILNIAREFGLQYSVPSVDDSDLCSVCLERSCSVAAEGCSHEFCIKCALYLCSTSNIR
VEFTGPPGSIPCPLCRNGIMSFNKLPSTPTEGLKSSSALTFCNPCILNTRSMDSPATVSR
AEIRRNRVAAVSSELVCPITCSPFPSSALPTCRCSDDDPCGATEAQDGSEVQSPRPSHSA
SMELDKRGEDLDRTSCSGMFWSRRSCHREQQCDAEINA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactcgctggggtgctcggcctccggcgagcggctcgtgtcggcggcgcgcgac
ggggacgccatcgaggcgcggatgctgctggagctcagcccggcgctcgcgcgctactcc
accttcggcggcctcaacaccccgctccacttcgcagccgccaagggccacctcgacatt
gtcacgatgctgctggagaaaggtgctgacgttaacgcgcgcaactactgcggccagact
gcattgatgcacgcatgtcggcatgggcactgggaggtggttcagatgcttcttctcttc
agatgcaatgttaccagggcagattacttgaatggccgaacggcattgcattttgccgca
catgatggatttgtacggtgtgtaaggcttttgcttgcagattttgtccctagtgtggcc
ttggaggatattgccacttcggtagtggatggtgattgtcagacaaatagcgggagcagt
cccaattcttcattggggcagaagtttaatgaacctgctcgtgtgaggtacataaacaag
cctgctgatggtggtgtaacagcacttcacatggcggcagtgaacggtcacttagattgc
atgcagttgttgattgacttgggtgctaatgtctcagccgtcacattcccctatggcact
actgcaaatttgataggagctggcagtacgccgttacattatgcagccggtggggggaag
ctggagtgctgtgagctattaatatcaaagggtgctagcaggttgacactcaactgtaat
gggtggcttcccatggatgttgctaggatatttggacggcgctctttggagccattactt
tctccaaattcacactcgagtgtccctgtatttcaaccgtccagttatcttgccttgcca
ctcatgagcatacttaatatagccagagaatttgggttgcagtacagcgtaccctcagtg
gatgatagtgatctctgttcagtttgtctggaaaggtcttgttctgttgctgctgaaggt
tgcagtcatgagttctgcatcaaatgtgctctctacctttgctcaaccagcaacatccgt
gtcgagttcacaggtccacctggatcgatcccatgccccctctgtcggaatggaataatg
tcattcaataagttgccaagcacaccaacggaagggcttaaatcaagttcagccctcaca
ttctgtaacccatgcatactaaacaccagatctatggactcgccagccactgtctccaga
gccgaaatcaggcgcaaccgggtggcagctgtctcttcggagctagtctgtccaatcacc
tgcagcccattcccgtcgtccgccctcccaacctgcaggtgcagcgatgatgatccatgt
ggtgctacagaggcacaggatggttctgaggtccaatctccacggccctcccacagcgca
agtatggagctggataagaggggagaggatctcgaccggaccagctgctctggcatgttc
tggagtcgaagaagctgtcacagggagcagcagtgtgatgcagagatcaacgcatga
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