Panicum hallii (Hall's panicgrass): 112874951
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Entry
112874951 CDS
T07366
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03015
mRNA surveillance pathway
phai04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112874951
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112874951
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phai01009
]
112874951
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112874951
03036 Chromosome and associated proteins [BR:
phai03036
]
112874951
Protein phosphatases and associated proteins [BR:
phai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112874951
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112874951
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112874951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
P2R3B_EF-hand
DUF5539
Motif
Other DBs
NCBI-GeneID:
112874951
NCBI-ProteinID:
XP_025794361
LinkDB
All DBs
Position
9:14733226..14741726
Genome browser
AA seq
541 aa
AA seq
DB search
MEVEPARRDAAALDPELLQLPELAPGALRENSIIADALYSQWLVLPETAKLVKSLIEDAK
TGTTLNVAGTSASTNAASSSSLPSMFPAGSAPPLSPRSTSGSPRVMRRGSGAGPSSLGSP
LKLVSEPVREVIPQFYFKNGRPPPKDLKEQCLSRIDHLFFGGEGLQIQEFRSVTKDICKL
PSFFSSVLFKKIDVACTGTVSRDAFVEYWINDNKITMDMASQIFEILRKPGYNYLTQDDF
KPVLKELLATHPGLEFLQGTPEFQERYAETVIYRIFYSINRSGNGHLTLRELKRGNLIAA
LQQLDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHSLTYRIVDR
IFTQIPRKFTSMTEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTSNEMQF
FYEEQLHRMECMAQEPVLFEDILCQMIDMIGPENESFFTLRDLKRCKLSGNIFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDASNGSGDVWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagccggcgaggagggacgcggcggcgctggacccagagctgctgcagctg
ccggagctcgcgccgggcgcgctccgtgagaattccatcatagctgatgcgctctactct
cagtggctcgtgctgcccgagacggccaagctggtaaagtctttgattgaggatgcaaaa
actggtactacgcttaatgttgctggaacctctgctagtacaaatgctgcttcaagtagt
tctctaccgtcgatgtttcctgctggtagtgctcctccactttctcctaggagcacttct
ggttctccccgtgttatgagacgaggatctggtgctggaccatcgtccttgggttctcca
ttgaaattagttagtgaaccagtgagagaagttatacctcagttttacttcaagaacggg
cgtcctcctccgaaagacttgaaggagcagtgcttatctagaatagatcacttatttttt
ggtggggagggtcttcagattcaagaattcagatcggtcacaaaggacatatgcaagctc
ccttcgttcttctctagtgttcttttcaagaaaattgatgttgcgtgcactggaactgtc
tcaagggatgcttttgttgagtactggatcaatgacaataagattacgatggatatggct
agccaaatatttgaaatattaagaaagccgggttacaactatctcactcaggatgacttc
aagcctgtcctaaaagaactcctggcaactcaccctggcttagagttcttacaagggacc
ccggagtttcaggagagatatgcggaaactgtaatatacagaatcttttactccataaat
agatctggaaatggccatcttacgctgagagagctcaaacgtggaaatttaattgctgca
cttcagcaattagatgaggaagaagatatcaacaaagtgttgagatacttctcatatgag
cacttctatgtgatctactgcaaattctgggagctggatacagatcacgatttcttgatt
gataaggaaaaccttatcagatatggaaatcattcattgacctatagaatagttgataga
atttttacacagataccaaggaaattcacaagcatgacagaaggaaagatgggttatgaa
gacttcgtttacttcatattatcagaggaagacaaatcatctgaacctagccttgaatac
tggtttaagtgcattgatcttgatggtaatggtattttaacttccaatgaaatgcaattt
ttctatgaggagcaattgcaccgcatggagtgcatggcacaggagcctgtgcttttcgag
gacatattatgccagatgattgatatgattggaccagagaacgagagcttttttacactg
cgggacttaaaacggtgtaaactctcaggaaatatattcaatattcttttcaatctgaac
aagttcatggcatttgaaactcgtgatccattcctcattcgccaggaacgtgaaaaccca
accctaactgagtgggatcgattcgcgcatagagagtatattaggttgtccatggaagaa
gatggtgaagatgcttcaaatggaagtggtgatgtgtgggatgaatcacttgaggctcca
ttctga
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