Panicum hallii (Hall's panicgrass): 112875037
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Entry
112875037 CDS
T07366
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112875037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112875037
03036 Chromosome and associated proteins [BR:
phai03036
]
112875037
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112875037
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112875037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
112875037
NCBI-ProteinID:
XP_025794504
LinkDB
All DBs
Position
9:complement(70239758..70244856)
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AA seq
1005 aa
AA seq
DB search
MAAGTVFPVLRSSEYFTRPSINDLVEREVADPGYCSRVPNFIIGRAGYGQVRFLGNTDVR
GIDLNDIVRFDKHSVVVYEDETGKPPVGHGLNKAAEVSLLLNLKDLQEPSILVEVLKCRA
RKQGARFLSFNPVNGKWKFEVDHFSRFGLVDEEEDVVMDEAAVRQPIAELRERDPPSNGY
EIELSHSLPAHLGLDPAKMQEMRMAMFYNEEDDEYMEDGFPSDERYLSRERMNVDSPTSS
GKGPRLRSVSPLHMSSQKAGRRSGMPSRKEPHALLEYSMNSSELGPSTQGMLMSGQNKGF
PVKMTKVEGFKLPAEQETPVAGKMYANCVVDAALFMGRSFRVGWGPNGMLVHSGSLVNSP
GTGLSSVIHIEKVASDKVVRDDKNKIKEDLAELVFSDPMDLHKSLDHEFLETESDSFRLK
LQKVVANRLVLPDICRSYIDIIERQLEVSDLSMSSRVLLMHQVTVWELIRVLFSERANGN
QLEPIGDDDQEGMVLDKKEGSVNIDLDALPLVRRADFSNWLQDSVCHRVQGEVSSLSDAR
YLEHILLLLTGRQLDPATEVAASRGDVRLAILLCQAGGSMSNRSDLSQQLDLWKMNGLDF
NYIEEDRLKVYELLAGNIQAAFLDSSIDWKRYLGLIMWYQLPPDTSLDTIIRFYDHLLSK
AKVPYPVPVYIDEGPLDEALKWSPGDRFDISFYLMLLHASQDEKFGLLKTMFSAFSSSYD
PLDYHMIWHQRSILEAIGAFNSNDLHLLDLSFVYQLLCLGKCHWAIYVILHMPYLDDAPY
IHEKLIREVLSQYCELWSKDDAQRQYIVELGIPEEWMYEALALYHEYYGDQQGALENFIR
CGNWKKAHTIFMTSVAHTMFLSSNHQEIWEITSALENHKSEIADWDLGAGIYIDFYILKN
SMQEESAMDDSDPLSKKNESCKSFFGRLNDSLLVWGSKLPVESRACYSKMADELCELFMK
APGVAMNLHMGCFQTMLSAPVPDDRKSSYMQEAVSLFTEILCSDS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggcactgtgttccctgtgttgcgctcctctgagtacttcacaaggccgtcg
atcaatgatctggttgagagggaggtggctgatcctggctactgcagcagggttccgaac
ttcatcatcgggagggctggatatggtcaggttaggttcctgggaaacaccgatgtgagg
gggattgacctgaatgatatcgtcaggtttgataaacattctgtggtggtttatgaggat
gagactggtaagcctcctgtagggcatggtcttaataaagcagcggaagtgtcattgctg
ctgaatctaaaggaccttcaggagcccagtatccttgttgaagtgctaaagtgtcgtgca
agaaagcaaggtgctaggtttctttcgttcaatccagtgaatggtaaatggaaatttgag
gttgatcattttagtagatttgggcttgtggacgaggaggaagatgttgtgatggatgag
gcagctgttcggcagccaattgccgaactaagagaaagagacccaccttcaaatggttat
gaaattgagctttcacattcattgcctgctcatcttgggcttgaccctgcaaagatgcaa
gaaatgaggatggctatgttttacaatgaggaagatgatgaatatatggaggatgggttc
ccatctgatgagaggtaccttagcagagaaaggatgaatgtggattcacccacttctagt
ggtaaaggtccaaggttaaggtctgtctcacccttgcacatgtcttctcaaaaggctggc
aggaggtctggtatgccttctcggaaagaaccacacgcactattggaatacagtatgaat
tcttcagagcttggtccatcgactcaaggcatgctaatgtctgggcaaaacaaaggattt
ccagtgaaaatgaccaaggttgaaggctttaagctgccagctgagcaagaaactcctgtt
gctggaaaaatgtatgctaattgtgtagtggatgctgctttattcatgggtaggtcattt
cgtgttggttggggaccaaatggtatgctcgttcattcaggtagtctggtaaatagtcct
ggaactggcctatcttctgttattcacatagagaaagttgcaagcgacaaagttgtgcgt
gatgataagaacaagattaaggaggacctagcagaactagttttttctgatccgatggac
ctccataagagtcttgatcatgaatttctggagactgagtctgactcatttagattaaag
cttcagaaagttgtggcaaatcgtttggttttgccagacatctgcaggtcatatattgac
atcattgaaaggcagcttgaagtcagtgatctatctatgtcatcacgtgtgctgttaatg
catcaagttacagtctgggaattaattagggtcttgttctcagaaagagcaaatggaaac
cagttggagcccattggagatgatgatcaggaaggcatggttttagacaagaaagaaggt
tccgtcaacatagatcttgatgcactccctttggttaggagagcagactttagcaattgg
ttgcaggacagtgtttgccatcgggtgcaaggcgaggtcagttccttaagtgatgccagg
tacttggaacatattcttcttcttctgactggtcgacaattggacccggccacagaagtt
gctgcgtcaaggggtgatgtgcggttggcaatcttgctatgtcaggcaggtggatcaatg
tcaaatcgatctgacctttctcagcaactggatctatggaaaatgaatggcctagatttt
aattatattgaggaagacaggttaaaggtatatgagttgcttgctggtaacatacaggct
gctttcctagattcatcaattgactggaaaaggtaccttggtttgatcatgtggtatcaa
ttaccacctgatacatcacttgatactataattcgtttctacgatcatctcctgagtaag
gccaaggttccctatcctgttcctgtatatatagatgaaggaccacttgatgaagcactt
aagtggtccccaggtgaccgttttgacatctctttttacctaatgcttcttcatgccagt
caagatgagaagtttgggctgctaaaaactatgtttagtgcattctcatcttcatatgat
cccttggactatcatatgatatggcatcagcgttcaattttggaagctattggtgctttc
aattcaaatgatcttcacttgctggatttgagttttgtttatcagttactttgtcttggg
aagtgccattgggctatctatgtcattctacacatgccatatctcgatgatgccccatac
atccatgagaagttaatcagggaagttctatcacagtattgtgagttgtggagtaaagat
gatgctcaaaggcaatacattgtggaacttggtataccagaagaatggatgtatgaagct
ctggctctttatcatgaatactatggagatcagcagggtgcactggagaattttattcgg
tgtggcaattggaagaaagctcatactattttcatgacctctgttgctcatactatgttt
ctgtcatcaaaccatcaggagatctgggagatcacaagtgccttggagaatcataagtct
gaaattgctgactgggaccttggtgccggaatatacattgatttctacattctgaagaat
tcaatgcaagaagaaagtgcaatggatgattcggatccactttcgaagaaaaacgaatca
tgcaaaagtttcttcggccgattaaatgattcattactagtctggggaagcaaattacct
gttgaatcaagggcatgctactcaaagatggcagatgagctatgtgagcttttcatgaag
gccccaggcgtggcaatgaatctacacatgggatgtttccagacgatgctgagtgctccg
gtccctgatgaccgcaagtcgtcgtacatgcaggaggcagtctctctcttcaccgaaatt
ctgtgcagtgattcatga
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