Panicum hallii (Hall's panicgrass): 112875039
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Entry
112875039 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase Os03g0188200-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112875039
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112875039
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
112875039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
OAD_gamma
zf-C3HC4_3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
112875039
NCBI-ProteinID:
XP_025794506
LinkDB
All DBs
Position
9:69507847..69509344
Genome browser
AA seq
362 aa
AA seq
DB search
MARRDTTPPPLLLLLLLSTAARPSLAQPINVTSGGGNHRSRTAGGFTPTTVIVLVVLISA
FVVLTLFSIYINRCAPARPPPRRPSRYAPDQQAAADGAAGAARADRGAQAGLDRGTVESF
PTAVYGDVKARVAAKSGPLECAVCLAAFEDHDELRVLPACCHVFHPDCIDPWLAGAVTCP
LCRADLTMASPPAPTATESCDLTVRQEAVREEPDEEEEEERDEACLVAPFTPESVMSFGV
ARSHEFHFRRTQSAMDTRPDCHTLRLPEHVMKELAAVRRHRRAASLAGYPDAVERTPRWL
ASLWRSVSWQRQGRTDPDAPEEYGGSKRVVPITGAPEERPSGSGSAAVDEEEKSDIAALS
QV
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgcgataccacgccgccgccgctcctcctgctcctgcttctatccaccgcc
gcgcggccgtctctcgcccagccgatcaacgtcacgagcggcggcggcaaccaccgctcc
aggaccgccggcgggttcacgccgaccacggtgatcgtgctcgtcgtcctcatctccgcc
ttcgtcgtcctcacgctcttctccatctacatcaaccgctgcgcgccggcgcgccctccc
ccgcgccggccgtcccgctacgccccggatcagcaggccgccgccgacggagccgcgggc
gccgcccgggcggaccgcggcgcgcaggccggcctcgacaggggcaccgtggagtcgttc
cccaccgcggtctacggcgacgtgaaggcgcgcgtcgcggccaagtcggggccgctcgag
tgcgcggtctgcctcgcggcgttcgaggaccacgacgagctccgggtgctcccggcctgc
tgccacgtcttccacccggactgcatcgacccctggctcgccggagccgtcacgtgcccg
ctctgccgcgccgacctcaccatggcctcgcctccggcgcccaccgccaccgagagctgc
gacctgacggtgcgccaggaggcggtgcgggaagagccggacgaggaggaggaggaggag
cgggacgaggcgtgcctcgtggccccgttcacgcccgagtccgtcatgagcttcggcgtg
gcgcggtcccacgagttccacttccggcggacgcagtcggccatggacacgcggccggac
tgccacacgctgcggctgccggagcacgtcatgaaggagctcgccgccgtccggaggcac
cggcgcgccgcgagcctcgccgggtaccccgacgccgtggagcggacgccgcggtggctc
gcgtcgctctggcggtccgtgtcgtggcagcggcagggccggacggatccggacgccccg
gaggagtacggcggcagcaagcgggtcgtcccgatcaccggagcgccggaagaacggccc
agcggatcggggtctgctgctgtggacgaggaggagaaatctgacattgctgcgttaagc
caggtctga
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