KEGG   Panicum hallii (Hall's panicgrass): 112875057
Entry
112875057         CDS       T07366                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
phai  Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:phai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:phai04812]
    112875057
Cytoskeleton proteins [BR:phai04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     112875057
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st eIF2A Beta-prop_EIPR1 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_RIG_1st Beta-prop_VPS8 PROPPIN
Other DBs
NCBI-GeneID: 112875057
NCBI-ProteinID: XP_025794527
LinkDB
Position
9:13292640..13302661
AA seq 873 aa
MATKRAYKLQEFVAHASSVNCAKFGRRTSRILITGGEDLKVNLWAVGKPSALLSLSGLTS
PVESVSFDSSEVTIGAGSASGTIKIWDVEEAKVVRTFTGHRSNCASLDFHPFGEFLASGS
SDTNMKIWDIRKKKCIHTYKGHTRRIDVLKFTPDGRWIVSGGADNSVKIWDLTAGKLLHD
FSLHKGPVNCLDFHPHEFLLATGSADKTLKFWDLETFELIGSSGPENSREYFEPANVVRS
MKFNSDGKTLFCGLHETLKVLSWEPIICHDVVDVGWSTLADLTVDEGKLLGCSYNQNCVG
VWVVDLMKHEPYADNCAGSHLNGSVDGLIQSDNSKSAVFGRLLVSRSPAADETGSDTLLG
CPMSTSKDIPVSASSVVRKTLAKPPGKRDLQLTRSDSAPLLSPRVRLNPNFFDSQKRQPD
TAVALPASIVRSKVDLSSDAGMLSRNSRAAAAPMYKSVSHILGYDSKESSFLPVLAPRHS
SKGNVDPILSEAATGELPVIEPQNIEVGLSANHGKESGKLIHIIDSRSSKMVEEVGCIRI
TDDVGYKNINPETNLRVIPDIDCTRRAPECTKEREHIFLSKPISSQRKFIRKSSSAGDDS
RSDSVCTESVKSNEAGSWYGVSCFDKQNSDAAWNTEFANRERNEVIGMSQWMESSGRHAV
EHRPYSYNYDNIQYVPTLYSSRLHPTLPGKLSASASDEDDMYGLMENHQEFIHVMKSRLA
KLEVVCRCWQRNDIRDSIDATWRMLDFAVTTDIINALMENSNCITLDICASLLHLSSSLL
ESKYDRHLSVALGMILSLVKSFGATISSALSAAPPVGVDLEAEQRLKRCSLCFQELRKAS
ASLKSLTRRQGEVGRSAQELALFLQDILQLSSV
NT seq 2622 nt   +upstreamnt  +downstreamnt
atggccaccaagcgagcctacaagctccaggagttcgttgcacatgcttccagtgtcaat
tgtgccaagtttgggaggcggacatcgaggatcctcatcactggtggggaggatttgaag
gtcaatctttgggctgtagggaaacccagtgccctcctgagcctatcgggccttacaagt
ccagttgagtcagtgagctttgactcttctgaagttaccataggtgctggttctgcaagt
ggaacaataaaaatatgggatgttgaggaggcgaaagttgtccgaactttcactgggcac
agatcaaattgtgcatcgcttgatttccatccttttggagaattcttggcctctgggtct
tcagatacaaacatgaaaatatgggatattcgaaagaagaaatgcattcacacatacaag
ggccatacccggcgaattgatgtccttaaatttactcctgatggtcgatggattgtttct
ggaggggctgataactcggtgaagatctgggatttgacggctgggaaactcttgcatgac
tttagtcttcataaaggtccagtcaactgcttagattttcacccccacgagttcttattg
gctacaggttcggctgataagacacttaaattttgggaccttgagacttttgaattgatt
ggttcttctggacctgagaacagccgagaatactttgagccggctaatgtagttcgttct
atgaaattcaacagtgatggtaaaacacttttttgtggattacatgaaaccttaaaggtt
ctttcctgggaacccatcatatgtcatgatgtggttgatgtaggctggtccacattagca
gatttaactgttgatgaaggaaagcttcttggttgctcatataaccaaaattgtgttggt
gtgtgggttgtggatttgatgaaacatgagccctatgctgataattgtgctggatcacac
ttgaatggaagtgtagatggtttaattcaatctgataatagcaaatcagcagtgtttggt
agactgttagtttccagaagcccagcagccgatgaaactggttcagatactctgcttgga
tgcccaatgtctacttcaaaagacattcctgtctcagcttcttctgtggtaaggaagaca
ttggcaaagccacctgggaaaagggatctccagctcacaagatctgattctgcacctctc
ctttctcctagagttagattgaacccaaatttctttgacagccagaagagacagccagac
actgctgtagctttaccagcatcaatagttcgctctaaagtggatctctcttcagatgct
ggaatgctatctcgcaattcacgtgcagcggcagctcccatgtataaatcggtgtcccat
attttggggtatgacagtaaggaatcatctttcttacctgttcttgccccgaggcatagc
tccaaggggaatgttgatcccattctcagtgaagctgccacaggtgagttaccagttatt
gagcctcaaaatatagaagtaggtttatctgccaatcatggcaaagaaagtggcaagttg
atacatataatcgattcaaggagctcaaagatggttgaagaagttggctgcataagaatc
actgatgatgtaggatataaaaacataaatccagaaactaatttgagagttattccagat
attgactgtacaaggagggctccagaatgcacaaaagagcgtgagcatatatttctgtca
aagcctattagttcacagaggaaatttatcagaaaatcttcaagcgctggggacgatagc
cgttctgattcagtatgcactgaaagtgtcaagtctaatgaagctggtagttggtacggc
gtgtcttgttttgacaaacagaattctgatgctgcatggaatacagaatttgccaacaga
gagagaaatgaagtaattggaatgagccaatggatggaatcaagtggaaggcatgctgtt
gaacatcgaccttactcttataattatgataatatccagtatgtgccaacattatacagc
tcgaggctgcaccctacacttcctggaaaacttagtgcttcagctagtgatgaagatgat
atgtatggtctaatggaaaaccatcaagaatttattcatgtaatgaagtctaggctagca
aaactagaggtggtttgtcggtgttggcaaagaaatgatataagggattctattgatgct
acatggagaatgttggattttgctgtcactactgatataattaatgctctaatggagaat
agtaactgtatcactttagatatttgcgcttctctcttgcatctttcctccagtcttctt
gaaagcaaatatgacaggcatctgagcgttgccctggggatgattctcagccttgttaag
agctttggtgccactatttcttcagctttgtcggctgcgccgcctgttggtgtggacctt
gaggccgagcagaggttgaagcggtgcagtctatgtttccaagagctgaggaaggcgagt
gccagcctcaagtcgctgacaaggcggcaaggcgaggttgggagatcagcacaggagctc
gccctttttcttcaggatatcttgcaactgtcaagcgtgtaa

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