Panicum hallii (Hall's panicgrass): 112875075
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Entry
112875075 CDS
T07366
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112875075
Membrane trafficking [BR:
phai04131
]
Protein recycling
Others
EARP complex
112875075
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
112875075
NCBI-ProteinID:
XP_025794553
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Position
9:complement(56714244..56725887)
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AA seq
1090 aa
AA seq
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MRRDAPPPSTNPSASSSSSSSPLFGGGGDQLFEFGPSPLVFLPLLLIQGGGMDLSRVGEK
LLSSVRSARSLGLIPPIPAAPPPRPEVPERAAAAAAAARAIAGLPPHERINLPSNSEDLV
SIYGSNPQGEPVEELEEVFYEEEFDPIKYILQSIPEEGGDATYFDTQSTLRLAQLDKIAE
RLSHHVMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHITSSKNEVSRDLVVNVKSKK
KQALLDVLPVLTELRHALDMQMELETFVDKENYFQAFQLLPEYLQILENYSGLSAVQEMG
RWIEAWLARTIQKLDTHLLGVCQIFNEESYLTAVDAYALMGDVSGMAEKMQSFFLQEVLS
RTHCVLKEMLEEEVGNNTQKNRFTYSDLCVQVPEPKLRPCLLRTLESLFSLMRSYYAIMS
FSPGYKNIESEGPDLADKNGTSQDSGETLVDSGRGHSSAAVIQDGSVAEKNNRASSSEVN
NPDASTSGTGSPFYQLRTDATKLVAQTFQRGRRNLWQLATSRLSVLLSSSAVCSTSIYQF
LKNYEDLAIFILAGEAFCGFEASEFRQKLKTVCLNYVLSFHRQNIYALKMVLEKESWTIM
SAEASQIISLAGLTGDGAALCSPTSRSSKLPINSFHGSSTTANSGKQGLGFASWLKIENP
FSIKIENGSAESPKSNMLFNSSVNNNHGNGNNPSLDEENEDLLADFIDEDSQLPSRIPKT
KIVKGNSSHWKDGDISSQTGSSLSLLRMMDKYARLMQKLDIVNIELFKGISQLFGIFYHY
IYETFGHQDRSQSSKPLPDHQSSRLKAALSKISQDSDQWTKPQNVSYSPSSPLSMNSTFG
QMDVMPTAPPSSMFTSYGLKERCSAAETVSLVARVLNRSKSHLHSVLSKNNTSSVDEFYR
TLVDSVPDLTEHIHRMSARMLLHIDGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYK
TRLDHGGISKELQHLLMEYGIDSIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHI
VSANVRPKLQTVDTFIKAYYLPETEYVHWARSHPEYSKSQVVGLVNLVATMKGWKRKTRL
ETVEKIEAAP
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcgacgcgccgccgccatccactaacccctcagcctcctcttcctcctcgtcg
tcacccctcttcggcggcggcggcgaccagctgttcgagttcgggcccagcccgctcgtc
ttcctgcccctgctcctgatccagggcggcggcatggacctctcccgcgtcggcgagaag
ctcctcagctccgtccgctctgctcgctcccttggcctcatccccccgatccccgccgcg
ccccctcctcgccccgaggttccagaacgagctgcggcggcggcagctgctgcacgtgcg
atcgcggggttgccaccacatgagaggatcaaccttccatccaattcggaggacttggtc
tccatatacgggagcaacccacagggggagcccgtggaggagctcgaggaggtgttttat
gaggaggagttcgatccaataaagtacattctgcaaagtattccagaagaaggtggtgat
gccacctattttgatacgcagtctactttgagattagcacaacttgataagattgcagaa
cgattgtcacatcatgttatgggccaccatgaagaaatggtgaaggggatgcaattagtg
atggaactagaacaagacttaaaggttgcaaatgttatatgcatgaatggacgaaggcat
ataacctcttcaaagaatgaagtgtcaagggatctggttgtcaatgtaaaatcaaagaag
aaacaagctttgctggatgttcttcctgttcttacagagcttcgtcatgcactagacatg
cagatggaacttgaaacttttgttgataaagaaaattacttccaggcattccaattattg
cccgagtatttgcaaattttggagaattattcaggcctttctgctgtacaagaaatggga
cgatggatcgaggcatggttagctcgaacgatccaaaagttggacacccatttacttggc
gtttgtcagattttcaatgaagaaagctatctaactgctgttgatgcatacgcactgatg
ggtgatgtcagtggcatggctgaaaagatgcagagtttcttcttgcaggaagtactctct
cggacacattgtgtcctgaaagaaatgttggaagaggaggttggaaataatacgcagaaa
aataggtttacatatagtgatctttgtgttcaagttcctgagcccaaacttcgcccctgc
ttgttgagaacccttgagagcttattttcattgatgcgctcatattatgctattatgagc
ttttccccaggatataagaatattgagtccgagggcccagatctagcagacaagaatggc
acatctcaggatagtggtgaaactttagtcgattcaggaaggggtcattcaagtgcagca
gtcattcaggatggttctgtagctgaaaaaaataacagagcatcatcatccgaggtcaac
aatcctgatgctagtacatcaggaacgggttctccattctatcagctgaggacagatgct
acaaaacttgttgcacaaacatttcaaagaggacgaagaaatctttggcagctggcaaca
agtcgcttatctgttttactatctagttcggctgtttgttcaactagtatataccaattc
ctgaagaactatgaagatctcgccattttcattttggctggcgaagcattttgtgggttt
gaagctagtgagttccgccagaagttgaagactgtctgtttgaactacgtattgtctttt
caccggcaaaatatatatgcgcttaagatggtactggaaaaggaatcttggacaataatg
tctgctgaagcttcacagataattagtttagctggcctaactggtgatggtgctgcactg
tgctctcctaccagtagaagttccaagttgccaataaattctttccatgggagttcaact
acagccaattcagggaagcaagggctcggatttgcttcttggcttaagattgaaaatcca
ttttctattaagatagaaaatggctctgccgaatccccaaagtccaatatgcttttcaac
tcatcagttaacaataatcatggcaatggaaataatccatctctggatgaagagaatgaa
gaccttctagcggatttcattgatgaagatagtcagttgcctagtaggataccgaaaacg
aaaattgtaaaaggcaattcttcacattggaaagatggagacatttcatcgcagacaggc
tcgtcactttctctactaaggatgatggacaaatacgccaggctaatgcaaaagctggac
attgtcaatattgagctttttaagggtatctcccaactgtttggcatcttttatcattac
atatatgagacatttgggcaccaagacaggagtcaaagcagcaagcctttaccagatcat
caatcatctcggcttaaagccgctttatcaaaaatttcacaagactctgatcagtggaca
aaaccacagaatgtttcatattcaccttcatcccctttgtcaatgaattcaacttttggt
caaatggatgtgatgcctactgcgcctcccagttcaatgttcacttcctatggattaaag
gagagatgttcagccgccgaaacagtatcattggttgctcgagttttgaacagatctaaa
tcccatctacactcagtgttgtctaaaaataacacttcttctgttgacgagttctatagg
acactggtggattctgttccagatttgactgagcacattcacagaatgagtgcacggatg
cttttgcatattgatgggtatccagataagattgcaaatgctaaatgggaggtaaaggag
cttggaatagaacacaatggatatgttgatttgttattaggtgagttcaaacactacaaa
acaagattggaccatggaggaatttctaaggagctgcaacacctgttgatggagtatggc
atagatagcatagcagaagtcttagtggaaggtctctctagagtgaaacggtgcactgac
gaagggcgtgcattgatgtcgcttgacctgcaggtactaattaatgggttgcagcacatt
gtatcagcaaatgtaaggccgaagctgcaaactgtggacactttcataaaggcctactat
ttgccggagaccgagtacgttcactgggcacggtctcatccagaatacagcaaaagtcag
gtagtcgggttggttaacctggtggccaccatgaaaggatggaaacggaagacgagacta
gaaactgtcgagaagattgaggcggctccatag
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