Panicum hallii (Hall's panicgrass): 112875076
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Entry
112875076 CDS
T07366
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112875076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112875076
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112875076
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
112875076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112875076
NCBI-ProteinID:
XP_025794554
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All DBs
Position
9:71203962..71207891
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AA seq
242 aa
AA seq
DB search
MEFVDALTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG
QQVNSKEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID
IFLQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYVEDSAGG
PDVTVGILAKMDKVTLLQMDAKLPMDTFENVMGLAIEGCKAIATYIREVLLENTKRLECQ
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtggacgccctcaccggcttccgcgtcgacgggcgccgccctaacgagatg
cggcagctcaagggcgaggtcggcgtcgtcgcgcgggccgacgggtccgcgctgttcgag
atgggcaatactagggtcatcgccgccgtctacggccctcgagaggtccagaacaaaggt
cagcaagtgaacagcaaagaggctttggttcgttgtgagtataggatggcagaatttagt
acaggagatcggaggagaaagccgaaaggtgacaggcgatcaacagaaatttctcttgtt
attcgacagacaatggaggcaagcattttaacacatttaatgccacattcacagattgat
atatttctccaagttcttcaagctgatggtggaacaaggtcagcatgcatcaatgctgca
acactagctcttgcagatgccgggattccaatgcgagacattgtcacgtcttgtagtgct
gggtatctgtgttccactcctttgctagatctgaattacgtagaagacagtgctgggggt
ccagatgtcacagttggtattcttgcaaagatggacaaagtgactcttctgcagatggac
gcaaaactaccgatggacacatttgaaaacgtaatgggacttgccatagaagggtgcaaa
gcaattgcaacttacatccgagaggtgctattggagaacacaaagcggttggagtgtcag
cgtggttaa
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