Panicum hallii (Hall's panicgrass): 112875103
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Entry
112875103 CDS
T07366
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112875103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phai03009
]
112875103
Ribosome biogenesis [BR:
phai03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112875103
Pre-60S particles
112875103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IPO5
HEAT_EZ
Importin_rep_4
TPR_IMB1
Importin_rep_6
HEAT
HEAT_GCN1
TOR1L1_N
HEAT_2
HEAT_EF3_N
MMS19_C
Vac14_Fab1_bd
HEAT_MROH2B_C
TPR_DNAAF5
Arm
Cnd1
Ltn1_1st
Htt_N-HEAT_1
TPR_TNPO3_IPO13_3rd
VPS15-like_hel
Adaptin_N
ARM_TBCD_2nd
HEAT_GCN1_C
HEAT_Maestro
DNA_alkylation
RTP1_C1
Phasin_2
ARM_ECM29_C
Motif
Other DBs
NCBI-GeneID:
112875103
NCBI-ProteinID:
XP_025794599
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All DBs
Position
9:complement(7443494..7452639)
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AA seq
1111 aa
AA seq
DB search
MDPRAEADAAAVLGADPAALTALLADLTSPANEARSRAEQQFHALRGSHPDALALSLAHL
LLSPAHPSAPIAAVLLRRLIAPSSQAFVYPALSPATQSSLRALLLSAASAPALPRSVSRK
LSDAVAELASFLLPANAWPDLLSFLYKSIDSQSSPPGLQESALNILARLASHLAAVFPNL
HGLLLAALSHPSSADVRVAGLNAAISLIQSLPSAGARDQFQDLLPAMMRALAESLNCGNE
GSAQEALEMMIELAGAEPRFLRRQLPDVVASMLQIAEALGLEDGTRHLAVEFVVTLAEAR
ERAPGMMRKLPRYVGRLFAVLMTMLLDVQDEPAWHAAVSEEEDAGETGSYVFAQECLDRL
AIAVGGNTILPVAAELLPSFFSSEDWKRRHAALVTIAQIAEGSAKVMIKNLEQVVGMVLN
SFQDPHPRVRWAAINAVGQLSTDLGPELQNQLHHVVLPALASAMDDVQNPRVQAHAASAI
LNFSENCRPDILTPYLDGIVGKLLLLLQTGNQMVQEAALTALASAADSSQEHFQKYYDAV
MPYLKAILMNATDKSNRMLRAKSMECISLVGMAVGKQKFKDDAKQVMEVLMTLQGSQMEA
DDPITSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVCVTSAGPEDENGESDD
EGVETITLGDKRIGIRTSLLEEKATACNMLCCYADELKEGFFPWIDQVTSTLVPLLKFYF
HEEVRKASVSAMPELLRSAKLAIEKGQAQGRDKSYLKQLSDYIVPALVEVMHKEPEPQIC
ASILESLNESIQVSGTLLEENQVRSVVEGVKEVIVASANRRIERTERAKAEDFDSEEEDV
LREENEQEDEIFDQVGDCLGTLAKTFKTYFLPFFDELSMYLTPMLGKDRTSEERRIAICI
FDDVAEHCREAAVRYYDAYLPSLLEACTSENPDVRQAAVYGIGICAEFGGSAFRPHTGEA
LSRLYNVIKHPNALDLDNAMAYDNAVSALGKICQFHRDSIDASQVIPAWLSCLPIKNDLI
EAKLVHEQLCAMLEKSERELLGHNNQYLPKIVSVFAEILCAGKDLATEQTSSRMINLLRQ
LQTTLPPSVLASTWSSLQPQQQLALQSVLSS
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgggcggaggcggacgcggcggcggtgctgggcgccgacccggcggcgctg
acggcgctgctggcggacctgacctccccggccaacgaggcgcggtcgcgggcggagcag
cagttccacgcgctccgcgggtcccacccggacgcgctagcgctgagcctcgcgcacctg
ctgctctccccggcgcacccctccgcgcccatcgccgccgtgctgctgcgccgcctcatc
gccccgtcgtcccaggccttcgtctaccccgcgctgtcgcccgccacgcagtcctcgctc
cgcgcgctgctcctctccgccgcctccgcgcccgcgctccccaggtccgtctccaggaag
ctctccgacgccgtcgccgagctcgcctccttcctcctgccggccaacgcgtggcccgac
ctgctcagcttcctgtacaagtccatcgactcccagtcctcccctccggggctgcaggag
tcggcgctcaacatcctcgcccggctggcctctcacctcgccgccgtcttccccaacctc
catgggctcctcctcgccgctctgtcccatccctcgtctgctgacgtccgcgtcgcaggg
ctcaatgcggcgatcagcctcatccaatcccttccctccgcgggggcccgcgaccaattc
caggacctcctcccggccatgatgcgcgctctcgctgagtcgctcaactgcgggaacgag
ggctccgcgcaggaggctctggagatgatgattgagctcgccggtgcagaaccgcggttc
ctgcgccgccagctgcccgatgtggttgcctccatgctgcagattgccgaggccctggga
ttagaggatggcacccgtcaccttgctgtcgagtttgttgttacgcttgccgaggcacgg
gagcgtgcccctggaatgatgcggaagctgccacggtacgtcggacggctctttgcggtg
cttatgactatgctgctcgatgtccaggatgaaccggcatggcatgccgctgtgtctgag
gaggaagatgctggagagacaggaagctatgtcttcgcacaggagtgtctggaccggctg
gcaattgctgttggcggtaacacgattctgcccgttgcagctgagttgcttccatcattt
ttctcctctgaagattggaagagacggcatgcggcactggtgaccatagcacagattgca
gagggctctgctaaggtgatgattaagaatctggagcaggtggttgggatggtactgaat
tccttccaggatcctcatcctcgggtgaggtgggcagcaattaatgcagtagggcaactt
tcaacggatctgggtcctgagttacaaaatcagttgcaccatgtcgtgctacctgcacta
gcttcagcaatggatgatgtccagaacccacgcgtacaggcacatgctgcatcagctatc
ctaaacttcagtgaaaactgcagacccgatattttgacaccatacctagatggaatagtt
gggaaacttctattgttgcttcagactggaaaccaaatggtgcaagaggctgctctaact
gctttagcatcagcagcagattcttctcaggaacacttccaaaaatattatgatgcagta
atgccctacctcaaggctattcttatgaatgcgactgataaatccaacagaatgttgcgt
gccaaatccatggaatgcattagtttagttggtatggcagttgggaaacagaagtttaag
gatgatgctaagcaggtgatggaagttctcatgacactgcaaggatctcagatggaggct
gatgaccctataacaagttacatgctgcaagcatgggcaagactgtgtaaatgccttggt
caggatttcttaccatacatgagtgtggttatgccccctctgctccagtctgctcagctc
aaaccagatgtgtgtgtcacttctgctggaccagaagatgaaaatggtgaatctgatgat
gagggtgtcgagactattacactgggtgataagagaattggcatcaggactagtctactg
gaggagaaagctacagcatgtaatatgctgtgttgctacgctgatgagctcaaggaagga
tttttcccatggattgatcaggttacatctacacttgtacctctcctcaagttctatttt
catgaagaagttaggaaggcatctgtttcagcaatgccagagcttcttcgttcagcaaaa
ttggctatagaaaagggtcaagctcaaggtcgtgataagtcttatcttaagcaactatct
gattacatagttccagcccttgtagaggtcatgcacaaagaacctgaaccacaaatttgt
gcaagcattctggaatcattgaatgagtccatacaggtatccggaacacttcttgaagaa
aatcaagtaagatctgtagtggagggagtcaaagaagttatagttgcaagcgctaatagg
aggatagaacgaacagagagggcaaaggctgaagactttgattctgaagaagaggatgta
cttagagaagaaaacgaacaagaggatgaaatttttgatcaagttggtgattgtctaggc
actcttgccaaaacattcaagacttattttcttccattttttgatgaactctccatgtat
ttaacacctatgttgggcaaggatagaacatcagaagaaagaaggattgccatatgcatt
tttgatgatgtcgctgagcactgtcgtgaagcagcagttaggtattatgatgcatatctt
ccttctctattagaagcctgcacaagtgaaaatccagatgttaggcaggctgcagtttat
ggaattggcatttgtgctgaatttggcggttctgcatttaggcctcacactggggaggcc
ctatccagattatacaatgtaatcaaacatcctaatgctctggatttggataatgcgatg
gcatatgacaatgctgtttctgctcttggaaagatatgtcaatttcatcgtgatagcatc
gatgcatctcaggtcattcctgcttggttaagttgcctgccgataaaaaatgatttaatt
gaggccaagcttgtccatgaacagctgtgtgcgatgcttgagaagtctgagagggagctt
ttgggtcataataatcagtacctcccaaagattgtatctgtttttgcagagatattatgt
gcggggaaagatctggcaacagaacagacttccagcaggatgattaatctactaaggcaa
cttcagacaacattgcctccatcagtgttagcctcgacatggtcttctttgcaaccacag
caacagcttgctctacagtctgtgctgtcgtcatag
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