KEGG   Panicum hallii (Hall's panicgrass): 112875111
Entry
112875111         CDS       T07366                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112875111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112875111
   03041 Spliceosome [BR:phai03041]
    112875111
   03032 DNA replication proteins [BR:phai03032]
    112875111
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     112875111
Spliceosome [BR:phai03041]
 Complex A
  U1 snRNP components
   Sm proteins
    112875111
  U2 snRNP components
    112875111
 Complex B
  U1 snRNP components
    112875111
  U4/U6.U5 tri-snRNP components
    112875111
 Complex C
  U2 snRNP components
    112875111
DNA replication proteins [BR:phai03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     112875111
SSDB
Motif
Pfam: LSM SM-ATX DUF6897
Other DBs
NCBI-GeneID: 112875111
NCBI-ProteinID: XP_025794610
LinkDB
Position
9:complement(67001590..67005004)
AA seq 132 aa
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAVGVGRGRAVAMRARAAAGRGGG
PVGRGGAPPVRR
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagccggagcctgggaatccccgtgaagctgctccacgaggcggcgggccacgtggtg
acggtggagctcaagaccggcgaggtgtaccgggggtccatggtcgagtgcgaggacaac
tggaactgccagctcgagaacatcaccttcaccgccaaggatgggaaggtgtcgcagctt
gagcacgtcttcatcagaggaagcagagtgagatttatgattataccggatatgctcaag
aacgctcctatgttcaagcgtttggaagcgaggattaggggcaaaggatcagctgttgga
gttggccgtggtcgtgcggttgcgatgcgtgctcgggctgctgctggccgtggtggtggt
ccagtggggcgaggcggcgcacctccggtgaggagatag

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