Panicum hallii (Hall's panicgrass): 112875127
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Entry
112875127 CDS
T07366
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112875127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112875127
03051 Proteasome [BR:
phai03051
]
112875127
Membrane trafficking [BR:
phai04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112875127
Proteasome [BR:
phai03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112875127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Rad60-SLD_2
Dsc3_N
TSC22
Ubiquitin_5
TSP9
Motif
Other DBs
NCBI-GeneID:
112875127
NCBI-ProteinID:
XP_025794633
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Position
9:56952185..56956825
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AA seq
570 aa
AA seq
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MASGGEGAGSGESPPAAVGEAPAPAGATLHIRCANGSKFTVQADLAATVGAFKEVVAGSC
DVPAPQQRLIYKGRILKDEQTLESYGVETDHTIHLVRGVASPAASGAPAAASPLASSTPS
SGPAGGLGGLFPGVGAPRSGRPSGIFGPGFPELEQVEQHLSQNPNLMREIMNMPAMQNLM
NNPDLIRNMIMSNPQLREIMDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRNTDRAM
SNIESSPEGFNMLRRMYETVQEPFLNATTMGGEGNTASNPFAALLGNQGSNQPGQPATNA
PTPGSESTTGTPAPNTNPLPNPWSTNAGGAQGAARSGPTSSARTGATGGLGGSGSPDLSS
LLGGLAGSQRSGAAGGLGGLGSADLGSILGGSPDASFLNQMLQNPAMMQMMQSIMSDPQT
MNQLLNFNPNARNLMESNTQLREMFQNPEFLRQLTSPETLQQLLSFQQTLLGQLGQQQPS
QDGNNSGSATGTRGNPSLDTLMSMLSGLGSGGGLGVPNNSNVPPEELYATQLTQLREMGF
IDNAENIQALVATAGNVHAAVERLLGNLGQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggaggcgaaggcgccgggagcggcgagtccccgcctgctgccgtgggggag
gcgccggcaccggcgggggcgacgctgcacatccggtgcgcgaacggctccaagttcacg
gtgcaggccgacctggccgccacggtgggcgcgttcaaggaggtcgtggccgggagctgc
gacgtgccggcgccgcagcagcgcctgatctacaagggccgcatcctcaaggacgaacaa
accctagaaagctacggcgttgagacagatcacacaattcacttggtgcgtggtgttgcc
tcaccagctgcatcaggtgcaccagctgctgccagtccccttgcttcatctactcctagc
agtggcccagcaggtggcctgggaggcctatttccaggtgttggtgctccaagaagtggc
aggccatcaggtatatttgggccaggatttccagaattggagcaagttgagcagcattta
agccagaatcccaacttgatgagggagataatgaatatgccagcaatgcaaaatctcatg
aacaacccagatttaatacgcaatatgatcatgagcaacccacagttgcgcgagatcatg
gatcggaatccagatcttgcccatgtgctcaatgacccaagtgtcctccgccaaactctc
gaagctgctagaaaccctgaaatcatgagagagatgatgcggaacacagacagagctatg
agcaacattgaatcttctcctgaagggtttaatatgctccgacgcatgtatgaaactgtc
caggagcctttcctaaatgcaacaacaatgggcggcgaaggcaacacagcctcaaaccca
tttgcagctcttcttggcaatcaggggtctaaccaacctggtcaacctgcaacaaatgct
ccaactcctggttcagagtcaacaacaggaacccctgctccaaatactaatccacttcca
aatccctggagcaccaatgctgggggtgcacaaggagcagcacggtccggtcctactagc
agtgcaagaactggtgccactggtggcctgggagggtcgggttcaccagatttgagtagt
ttgctcggtggtcttgctggcagtcaaagatctggtgctgctggtggtttaggagggttg
ggatcagcagatcttgggagtattcttggtggttcacctgatgcttcttttctgaatcag
atgttgcaaaacccggcaatgatgcagatgatgcagagcattatgtctgatccacagacc
atgaaccagttgcttaacttcaacccgaatgcacgcaacctgatggaatcaaacactcag
ctgagggaaatgtttcaaaatccagaatttcttcgccagttgacatctccggagactttg
cagcaattactctcatttcagcagaccttattaggacagcttggtcaacaacaacctagc
caggatggcaacaattcaggcagcgccacaggtacgcgaggaaaccctagtcttgacacc
ttgatgagcatgctcagcgggcttgggtcaggaggtggcttaggtgttccaaataattcc
aatgtgccgccggaggagctctatgcaacacagcttactcagctccgagaaatgggtttc
attgacaatgcggagaacatccaagcactggttgcaactgctgggaatgtacatgccgcg
gtggagcgcctccttgggaatcttggccagtag
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