Panicum hallii (Hall's panicgrass): 112875130
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Entry
112875130 CDS
T07366
Name
(RefSeq) cyclin-H1-1
KO
K06634
cyclin H
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03022
Basal transcription factors
phai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112875130
09124 Replication and repair
03420 Nucleotide excision repair
112875130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112875130
03400 DNA repair and recombination proteins [BR:
phai03400
]
112875130
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112875130
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112875130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
112875130
NCBI-ProteinID:
XP_025794636
LinkDB
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Position
9:complement(5532538..5537271)
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AA seq
326 aa
AA seq
DB search
MADFRTSSQRERWIFQPHDLTERWAAANQRAAETLAQYGTTRLKVGSLDGSVHSPDHVEG
SSDVKPLSYEEEQLTRVFYEQKIQEVCAAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKH
IMLTCVYTSCKVEENHVSAEELGKGIQQDHQIILNNEIILLKTLDFDLIVYAPYRSIEGF
VDDLEGFCREDNSALQRLKELHQTAISYADKMMLTDAPLLYTPGQLALAALHKSNDTLKV
FNFERYLETIFSRQHSDCPVEQFVQSINAIHYLVDQLKIPTVKDMRHVDRKLKHCWDRSS
HDEHKKKEKKSKHKSKRTSTDAQLNG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttccggacctcctcgcaacgggagaggtggatcttccagccgcacgatctg
acggagaggtgggcggcggcgaaccagcgggccgcggagaccctcgcgcagtatgggacg
acgcggctgaaggtgggctcgcttgatggctcggtccattcgccggatcatgttgagggt
agctcggatgtaaagcctctgtcttacgaagaggagcaattgacacgagtattttacgag
cagaagattcaagaagtatgtgcagcattcaaattccctcacaaaatccaggctacagct
ataatatatttcaagagattctatctacagtggtctgttatggagcatcacccgaagcat
attatgttaacatgtgtatacacttcttgcaaagtggaagaaaaccatgtttctgctgag
gaacttggtaaaggaattcagcaggaccaccagatcattctgaataatgagataatcctt
cttaagactttagattttgatctcattgtttatgcaccatatcgatcaattgaaggattt
gttgatgacctggaaggtttctgcagggaagataatagtgcattacaacgtttgaaggag
ttgcatcaaaccgcgatatcctacgctgacaaaatgatgttgactgatgctcctcttctc
tatactccagggcagttggcactggctgctttgcacaagtccaatgatactctcaaggtc
ttcaattttgaaagatacttggaaactatcttctcaaggcaacattctgattgtccagtc
gaacagtttgttcagtcaatcaatgcaatccattacttggttgaccagcttaaaatacct
actgttaaggatatgaggcatgttgaccgcaagctgaaacattgttgggatcgaagctcg
catgatgagcataagaagaaagagaaaaagtcaaaacacaaatcgaaaagaacatctact
gatgcccagctcaacggctag
DBGET
integrated database retrieval system