KEGG   Panicum hallii (Hall's panicgrass): 112875130
Entry
112875130         CDS       T07366                                 
Name
(RefSeq) cyclin-H1-1
  KO
K06634  cyclin H
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03022  Basal transcription factors
phai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112875130
  09124 Replication and repair
   03420 Nucleotide excision repair
    112875130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phai03021]
    112875130
   03400 DNA repair and recombination proteins [BR:phai03400]
    112875130
Transcription machinery [BR:phai03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     112875130
DNA repair and recombination proteins [BR:phai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     112875130
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 112875130
NCBI-ProteinID: XP_025794636
LinkDB
Position
9:complement(5532538..5537271)
AA seq 326 aa
MADFRTSSQRERWIFQPHDLTERWAAANQRAAETLAQYGTTRLKVGSLDGSVHSPDHVEG
SSDVKPLSYEEEQLTRVFYEQKIQEVCAAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKH
IMLTCVYTSCKVEENHVSAEELGKGIQQDHQIILNNEIILLKTLDFDLIVYAPYRSIEGF
VDDLEGFCREDNSALQRLKELHQTAISYADKMMLTDAPLLYTPGQLALAALHKSNDTLKV
FNFERYLETIFSRQHSDCPVEQFVQSINAIHYLVDQLKIPTVKDMRHVDRKLKHCWDRSS
HDEHKKKEKKSKHKSKRTSTDAQLNG
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcggatttccggacctcctcgcaacgggagaggtggatcttccagccgcacgatctg
acggagaggtgggcggcggcgaaccagcgggccgcggagaccctcgcgcagtatgggacg
acgcggctgaaggtgggctcgcttgatggctcggtccattcgccggatcatgttgagggt
agctcggatgtaaagcctctgtcttacgaagaggagcaattgacacgagtattttacgag
cagaagattcaagaagtatgtgcagcattcaaattccctcacaaaatccaggctacagct
ataatatatttcaagagattctatctacagtggtctgttatggagcatcacccgaagcat
attatgttaacatgtgtatacacttcttgcaaagtggaagaaaaccatgtttctgctgag
gaacttggtaaaggaattcagcaggaccaccagatcattctgaataatgagataatcctt
cttaagactttagattttgatctcattgtttatgcaccatatcgatcaattgaaggattt
gttgatgacctggaaggtttctgcagggaagataatagtgcattacaacgtttgaaggag
ttgcatcaaaccgcgatatcctacgctgacaaaatgatgttgactgatgctcctcttctc
tatactccagggcagttggcactggctgctttgcacaagtccaatgatactctcaaggtc
ttcaattttgaaagatacttggaaactatcttctcaaggcaacattctgattgtccagtc
gaacagtttgttcagtcaatcaatgcaatccattacttggttgaccagcttaaaatacct
actgttaaggatatgaggcatgttgaccgcaagctgaaacattgttgggatcgaagctcg
catgatgagcataagaagaaagagaaaaagtcaaaacacaaatcgaaaagaacatctact
gatgcccagctcaacggctag

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