Panicum hallii (Hall's panicgrass): 112875166
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Entry
112875166 CDS
T07366
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112875166
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
112875166
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_HPS5
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
112875166
NCBI-ProteinID:
XP_025794691
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All DBs
Position
9:complement(10514943..10520106)
Genome browser
AA seq
1326 aa
AA seq
DB search
MKNLRLVTRLPQQLQLQLGGETLVASAIDPERRRAFFASSVNFIYTVQLPAASAQGQQPL
PWSKITAQHSDVEEVVLEPGDCIVAMDYLMERESLLLGSSAGCLLLYNVEEKTTEVVGRL
EGGVNTIASSPDGALLSVTTGLGQLLVITQDWEVLFEASLDPHDATIGDKDSTGCQIRSS
ISWRGDGKYFATLGALDGAIGPTKLTIWERESGKVHSSSDAKTFMGALLDWMPSGAKVAT
AHDRRAEGKCPLIVFYEKNGLERSHFSIDEPAEVAIHALKWNCNSEILAALVSSEQHDVI
KIWSCRNNHWYLKHELRYTKEERVKFFWDPTKPMHLICWTQGGQVIIHRFSWTTAVSETS
VALVIDGSHVLVTPLNLGLMPPPMSLFHLAFPCAVNEVSFVSSNSKTHLAAYLSNGSLCV
LELPAPDSWEEFEGNRINVDPCCSGFTLDNCMHLAWIDTHTLIGICCHSERCCSTPTGSS
ETSNLVHKHDSLFSINEIELVRSEDSVPGSVISSGWQARVSKKVPMQSSVIGVSQNPAKK
GSAFIQISGGRIVEYCSSLNLLKMSAQLNEVDSDHGFPAACPWMTAVLCHENGMAQPFLF
GLDDNSNLYMGKRLLSNNCSSFTFYSSAYGTTERVMSHLLVTTKKDLLFIVDINEIFLKD
NEVTVDSHVSSHPRGKQSKEHITVWEKGAKLVGVLHGDEAAVIMQTTRGNLECTYPRKLV
LVSIVQALAQRRFKDAMDMVRRHRIDFNIIVDYCGCNVFIKLAADFVKQVNNLSHITEFV
CSMKNSNSSSKLYEAYMSFPDHSTDSMVDNECNKVTSVLMAVGKALEEQMEESSSRELCV
LTTLARSEPPLLEESLNRIKAIRELELLGVDDARRKLYPSAEESLKHLLWLTDTEAVFGA
ALGLYDLNLAAIVALNSQKDPKEFLPFLKSLECLPPAVMRYTIDLRLGRYESALRNIVSA
GNEYHEDCMKLLNANPQLFPLGLQLFNESDKRNEILEAWGDHLSEEKCFGDAALTYQCCL
SYQKSLKAYRACGDWKGVFTVAGLLELEKEEITQLAHELCDEFQALGKPGDAARVALEYC
SDAERGVSYYITAREWEEALRVAYMLSRHDLVGTIRDAALDCAASLISEYQEGLLKVGKY
VARYVAVRQRRLSLAAKLQSEDRFMDVEDDSVSEVSTSFSEMSAYTTRSTKESSASVISS
SASKSRGARRQKKGGKIRAGSPGEEMALVEHLKGMALTDGAENELKNLLVVLIQLGKEET
ARQVQQAADSFEVSQRAAVKLSEDTVCNDKVDENVHTLEHYIRMLRAHGSGHSETGSWRI
KALSPP
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctgcgccttgtgacgaggctcccgcagcagctccagctccagctcggcggc
gaaaccctcgtcgcctccgcgatcgaccccgagcgccgccgcgccttcttcgcctcctcc
gtcaacttcatctacaccgtccagctccccgccgcctccgcacagggacagcaaccactg
ccatggagtaaaattactgctcaacactccgacgtggaggaggttgttcttgagcctgga
gattgcatagttgccatggattatctcatggagagggagtctctactccttggttcatcg
gctggttgcctgctcttgtataatgtggaggaaaaaacaaccgaagttgttggaagactg
gaaggtggtgtcaacaccattgcctctagccctgatggtgctcttctttctgtaaccact
ggacttgggcagctgcttgtcatcacacaggattgggaagtgctgtttgaggcttctctt
gatcctcatgatgctaccataggcgacaaagacagtaccggttgtcagatacgaagctca
atttcttggcgtggggatgggaaatattttgctacacttggggcccttgatggcgccatt
ggccctacaaagcttactatatgggaacgtgaatcaggaaaggttcattcatcttcggat
gccaaaacttttatgggagcattgttagattggatgcctagtggagccaaggttgccaca
gcccatgatcggagggcagagggaaaatgccctctcattgtattctatgaaaagaatggc
ttagagaggagccacttttccattgatgagccagcagaggttgccattcatgctttaaaa
tggaactgcaattccgagatcctagctgctctggtttcttctgagcagcatgatgttatt
aaaatatggtcctgcaggaacaatcactggtacttgaaacatgaactgcggtacacaaag
gaagagagggtgaagttcttttgggatccaacgaaaccaatgcatctgatttgctggaca
cagggtggccaagtcattattcacaggttttcttggactaccgcagtcagtgagacttca
gttgcacttgttattgatggttcccatgttcttgttactcctcttaatttgggcctcatg
ccacctcccatgtctctgttccacctcgcatttccttgtgcagtgaatgaggtttctttt
gtgtccagtaactcaaagacccacttggctgcttatctctcaaatggcagcttgtgtgta
ctggagcttccagcaccagattcttgggaagaatttgaaggcaacaggataaatgttgac
ccttgctgttctggcttcactctggataactgtatgcaccttgcttggatagatacccac
accttgattggcatctgttgccatagcgaacgctgctgttcaacaccgactgggtccagt
gaaactagtaacctggtacacaaacatgattcactgttttccatcaatgagattgaactt
gtacgttcagaggattctgtgccaggttcagtgatttcatctggttggcaagctagagta
tcaaagaaagtgccaatgcagagttcagtcattggagtctctcagaatccagcaaaaaaa
ggttcagccttcattcaaattagtggaggaaggattgttgagtactgttcaagtttaaat
ctgttgaaaatgtcagcacaactcaatgaggttgattctgaccatggttttccagcagca
tgtccttggatgactgcagttctgtgccatgaaaatggtatggctcaaccctttctcttt
ggacttgatgataacagcaacctttatatgggcaaaaggttattgagcaacaactgcagc
agcttcacattctactccagtgcttatggaaccactgagcgagttatgagccacttactt
gtgactactaagaaagatcttctattcattgtggatatcaatgagatctttcttaaagac
aatgaggtgacagttgacagccatgtcagtagccatcctcgaggaaagcaaagcaaagag
cacatcactgtgtgggaaaagggagcaaagttggttggtgttctccatggtgatgaagca
gctgtcataatgcaaactacacgtggtaacttagagtgtacttaccctagaaagctggtc
cttgtttcaattgttcaggcattggctcagaggcgtttcaaagatgcaatggacatggtg
aggcggcatcggatagatttcaatatcattgttgattattgtggttgtaatgtttttatc
aagttagcagcagattttgtcaaacaagttaataaccttagccacatcactgaatttgtt
tgctcaatgaagaacagcaattcaagcagcaaattgtatgaagcctatatgtctttccct
gatcactctacggactcgatggttgataatgagtgcaacaaagtcacttctgtactgatg
gcagttggaaaagcccttgaggaacaaatggaagagagctcatcaagagaactttgtgtt
ctgaccactttagcccgtagtgaacctccattattggaggaatcactaaacagaataaaa
gcaattcgagaattggaacttcttggcgttgatgatgccaggagaaaactttacccttct
gctgaagagtctctgaagcacttgctttggttaacagacactgaagctgttttcggtgct
gctttggggttgtacgatctgaatcttgctgctatcgttgctttgaattcccaaaaagat
ccaaaagagttcctcccatttctcaagagtcttgaatgccttcctcctgctgtcatgaga
tacacgattgatttaaggcttggaagatatgagagtgccctcagaaacattgtttctgct
ggtaacgagtaccacgaggattgcatgaagctccttaatgctaatcctcagctgttccca
ctgggcctccagttatttaatgaatcagataaaaggaatgaaattcttgaggcatggggc
gaccatctttctgaagagaaatgctttggagatgccgcattgacttaccagtgctgtttg
tcatatcagaaatcattgaaagcttaccgtgcttgtggggactggaaaggcgtgtttact
gttgcaggtcttttggagttagaaaaggaggaaattactcagcttgcacacgagttatgt
gatgagttccaagctctcggcaagccaggagatgctgctagagtagcactggagtattgt
tcagatgccgagagaggtgtaagttattatatcacggcaagggaatgggaagaggctctt
agagttgcttatatgcttagcaggcatgatctggttggaactattagagatgcagctttg
gattgtgccgcatcgctgatatccgagtaccaggaaggactgctgaaggttggtaaatat
gtagcacgttatgtggctgtgcggcagaggagattgtcgcttgctgccaaactccagtca
gaagatcggtttatggatgttgaagatgacagcgtttcagaagtgagcactagcttcagc
gaaatgagcgcatataccacaaggtcaaccaaggagtcaagtgcttcggtcatatccagc
agcgccagcaagtcacgaggagcaaggcggcaaaaaaaaggtggcaagatacgagctgga
agtcctggggaggagatggcccttgtggagcatctcaaggggatggcgctgacagacggt
gctgaaaatgagctgaagaaccttctcgtggttctaatacaattggggaaagaagaaact
gcccgtcaggtgcagcaggctgcagatagctttgaagtgtctcaaagggctgcagtgaag
ttgtctgaggatacagtatgtaacgacaaggtagatgagaacgttcacacccttgagcat
tacataagaatgctgagggctcatgggtcaggtcatagcgagactggttcatggcgaatc
aaagcattgtctcccccttga
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