Panicum hallii (Hall's panicgrass): 112875167
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Entry
112875167 CDS
T07366
Name
(RefSeq) protein argonaute 12-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112875167
03036 Chromosome and associated proteins [BR:
phai03036
]
112875167
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112875167
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112875167
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112875167
microRNA pathway
RISC loading complex
112875167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
112875167
NCBI-ProteinID:
XP_025794692
LinkDB
All DBs
Position
9:8121433..8128311
Genome browser
AA seq
1080 aa
AA seq
DB search
MSSRGGGGGRRGGRSDQGGGRGGAGAGRGRGREGAADLGAHPTGVARGWGGGRGDRGGAA
APGAAQRGGNFQPPHPVAGAGRGGYPGVAHQGRGQQVSAPAPTPSEVEALRRQVERKAVV
TQVPAAGPFEGPSSAPAQRQAPSPVLSPAAAARPRMQAKAPGQAAPPATAGSSSSVPARA
PAPGQAPAATARLETQGKSPAQATQMALAAPAGRLPPASSKALVLAPRPGYGTAGRKCRV
RANHVQVRLADKEIYHYDVAITPESISRARNRWIINELVNLHKEYLGGRLPVYDGKKGLF
TAGPLPFKAKEFVLMLTNPERANLGEKEYKVVIKDASKIDMYSLQQFLAGRQREMQQEII
QALDIALRECPSSRYTSISRSFFSSQEFGPGGPLGNGVECWRGYYQSLRPTQMGLSLNID
ISATAFYKAQPIIDFAVEYLNVRDTSKRLSDQERIKLKKALKGVRVETTHRRDISIRYKI
TGLTSAALNDLTFDQDGTRVSVVQYFRRQYNYSLKYTHWPCLQAGSASRPTYLPMEVCNI
AKGQRYSSKLNEHQVKNILRLACQRPAEREERTLGVLKKNNYTADDYAKEFGIKVNNQLA
LVDARVLPAPKLKYHESGKEKVCNPFVGQWNMINKRMVDGGSIRFWACLTFTSQIHPNEI
GRFCEDLVMMCNSIGMRISTQPCVQIKKARQENLEAAIRDIYGHSAEVLAQQGLSGQQLE
LLIIILPDMSGSYGLIKRLCETEVGVITQCCAPKNVKKGGKQFLENLALKINAKVGGRNT
VLEDALNRNIPLLTDMPTIVFGADVTHPSPGEGSAPSIAAVVASMDWPQVTKYKCLVSSQ
GHRVEIINDLFTEVRDSVKGIVRGGMIRDLLISFKKSTGHKPKRIIFYRDGVSEGQFSQV
LLYEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPENHRSKDQTDRSGNILPGTVVD
TTICHPSEFDFYLCSHSGIQGTSRPAHYHVLFDENRFSADALQTLTYSLCYTYARCTRSV
SIVPPAYYAHLGAFRARYYMEEDNFDQGSSTGTSWTYDQSVPVKQLPKIKENVQQFMFYC
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgcggcggtggaggcggccggcgcggaggccggagcgaccagggaggaggc
cgtggaggcgccggcgccggccgagggcgcggccgtgagggcgccgcggacctcggtgcc
caccctaccggcgtcgcgcgaggatggggtggcggccgtggcgatcgcggcggtgccgcg
gcgccaggcgccgcccagagagggggcaacttccagcccccacatccggtggccggggcc
gggagaggtggctaccctggcgtggctcatcaggggcgcgggcagcaggtttcagcgccg
gcgccgacgccttcggaggttgaggcgctgaggcgccaggtggagaggaaggctgtggtg
acacaggtgcctgcggcggggccctttgagggcccgtcatcggccccagcgcagaggcag
gctccgtcgccggttctgtctcctgcggccgcggcgcgaccgcggatgcaagcgaaggcg
ccgggccaggcggcgccgccggcgactgcagggagctcatcgtctgtcccagcacgggcg
ccggcgccgggccaggcgcctgctgccacggcgcgattggagacgcaagggaagtcaccg
gctcaggcgacacagatggcgctggcggcgcctgcagggaggctgcctccggcttctagt
aaggcgctggtgctcgccccgcggccggggtacggaacggccggccggaaatgccgcgtg
cgcgccaatcatgtacaggtccggctcgccgacaaggagatctaccactacgatgtggcg
atcactcccgaatcgatctcccgggcaagaaacagatggatcatcaacgagctcgtgaac
ttgcacaaggagtacttgggcgggcggcttcctgtttatgatggaaagaaaggcctgttc
acagcaggtccactgccattcaaagccaaagaatttgttctcatgctaacaaaccctgag
agagcaaacctgggggagaaagagtacaaggtggtgatcaaggacgcctcaaagatagat
atgtacagccttcagcagttcttagctggtaggcagagagaaatgcaacaggagattatc
caggctcttgatatcgctctgagggaatgcccatcctctaggtatacatccatctcaaga
tcatttttctcatcacaagaatttggacctggtggaccactcgggaatggtgtcgaatgc
tggaggggttactatcagagcctacgccctacacagatgggcttgtcccttaacattgat
atttctgcaacagcattttacaaggctcaacccatcatagactttgcagtcgagtatctg
aacgtccgtgatacttcaaagcgtttgtctgatcaggaacgcataaaactgaagaaagca
ctcaagggtgtccgggtcgagaccacacatcgccgtgatatatccatacgatacaagatt
acagggctaacctcagctgcattaaatgatttgacgtttgatcaagatggcacaagggtg
tcagttgtgcagtacttcagacggcaatataattactcactgaaatacactcactggcca
tgccttcaagctggcagtgctagcagaccgacctatttacctatggaggtttgcaacata
gctaagggacagcgctactcgagtaagctgaatgagcatcaagtcaaaaatatcttgagg
ttggcctgtcagcggccagcagagagagaggagagaactttgggggttctcaagaagaac
aactataccgctgatgattatgcaaaagaatttggcattaaggtgaacaaccaacttgcc
ttggttgatgctcgtgtgcttccggcaccaaagcttaaataccatgagtctggaaaagaa
aaggtttgtaacccttttgttggccagtggaacatgattaataagagaatggttgatgga
ggatctatcagattttgggcatgtctaacttttacctctcaaatccatccaaatgagatc
gggaggttttgcgaggatcttgtaatgatgtgcaacagcattggcatgcgaataagcacc
caaccgtgtgtacaaatcaagaaagcacgccaagaaaatttagaagctgcaatcagagat
atttatgggcattctgcagaagtgcttgctcagcaaggtttatcagggcaacaacttgag
ttactcatcataattttacctgatatgagtggttcttatggactgattaaaagactttgt
gaaactgaggttggtgtaataactcagtgttgcgcacctaagaatgttaagaaaggagga
aaacagtttcttgaaaatctcgccctaaaaatcaatgctaaggttggagggaggaacaca
gtgcttgaagatgctttgaacaggaatataccacttctaacagatatgcctacgatagtc
tttggagctgatgttacccatccatctcctggtgagggctcggctccatctattgcagcg
gtcgttgcatccatggattggccgcaagttactaagtacaaatgcttggtgtcttcacaa
gggcatagggtcgaaatcataaatgatcttttcacagaagtgagagattcagtcaagggc
attgtcagaggtggaatgattagggatttgcttatttcattcaaaaagtcaactggccat
aagccaaagaggattatattctatcgagatggtgttagtgaggggcagttcagccaagtc
ttgctttatgaaatggatgctattcggaaggcatgcgcaagtttagaggagggttatctt
cccccagtcacatttgttgttgtgcaaaagaggcatcacacccgcctgtttcctgaaaat
catcgttcaaaagatcagacagataggagtggaaacattctacctgggacggttgttgac
acaacgatatgccatcccagcgagtttgatttttacctctgtagccattctggtattcag
ggaacaagccgcccagcacattatcatgttcttttcgacgaaaataggttctctgctgac
gcgctacagaccttgacttacagtctgtgctacacctatgcccggtgcactcgttcagtg
tctatagttcctccagcttattatgcgcacctgggcgcgttccgtgcgcgttactacatg
gaggaggacaatttcgaccaaggctcatcgacggggacctcttggacgtatgatcaatct
gtccccgtgaagcaactccccaaaatcaaggaaaacgtccagcagttcatgttctactgc
tag
DBGET
integrated database retrieval system
