Panicum hallii (Hall's panicgrass): 112875272
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Entry
112875272 CDS
T07366
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112875272
04121 Ubiquitin system [BR:
phai04121
]
112875272
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112875272
Membrane trafficking [BR:
phai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112875272
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112875272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Zf_IFT144_1st
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
112875272
NCBI-ProteinID:
XP_025794850
LinkDB
All DBs
Position
9:complement(2058996..2061942)
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AA seq
381 aa
AA seq
DB search
MDEGRGVRYWCHMCEEVIDPMPEMKCPSCEGGFVEEMDSEGFEPATDTRSDRSLSALAPL
LFGMLEGSSRRSRLRREAMEDADADEDDGEEEDDDEDDSDREFELFSRRRRRPSALSRLI
QTMHDDIRGLDHTGSDTERDMERERRERRRAERQAVERRVERQRERLRAIERLSNRGRER
TESLILINSNNEAIILQGTFGRDQEESSNTSSGVSLGDYFLGPGLDILLQRLAESDLNRS
GTPPAKKEAVAALPTVNIKEVLGCSVCLEDFEIGAEAKQMPCQHKFHSQCILPWLELHSS
CPICRFQLPTEETKNPCESASSAGAMNGDGDNVVASSSDTESINRNGDNHSDSPIFSALS
ALFSDPSSSSDDESAPRSSET
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggccggggagttaggtattggtgccacatgtgtgaggaggtgatcgatcct
atgccggagatgaagtgccccagctgtgagggtgggtttgtggaagagatggactctgaa
ggctttgaaccagctactgacacgaggtctgatcgctccctctctgctttggctccactg
ctttttggtatgctggagggttcatcgcgcagatcaagactcaggagggaggccatggag
gatgctgatgctgatgaggatgatggtgaggaggaggatgatgatgaggatgattcagac
cgtgagtttgaactattcagtaggaggcgaaggcggccgtcagcactttccaggctgatt
caaactatgcatgatgacataaggggcttggatcacactggcagtgatacagagagagat
atggagagagaaagaagggagaggcggagggcagagaggcaggctgtggagaggagggtg
gagaggcagagggagaggctaagggcgatagagagactgagcaatcgtgggagagagagg
acagaaagcctaatactgatcaactccaacaatgaggccatcatcctccaaggaacattt
ggacgcgaccaagaggaatcaagcaacacaagttctggtgtatcacttggggattacttt
cttggtcctggcttagatattctcttgcagcgtttggcagagagtgatctcaatcgttct
ggcacaccacctgccaagaaggaggcagtagctgcattgccaactgtgaacatcaaggaa
gtgttgggctgttcagtctgtcttgaggattttgagattggggcagaagcaaagcagatg
ccctgtcagcataaattccactctcagtgcatccttccatggctggagcttcacagttct
tgtccaatctgtcgatttcagttgcctactgaggagacgaagaacccatgtgaatcagcc
agcagtgctggggccatgaatggcgatggagacaatgtcgttgcaagcagtagtgataca
gaaagtattaaccgtaatggagacaaccattcagatagtcctatcttctctgctctgagc
gcactcttctctgatccatcctcatcatctgatgatgaaagtgccccacgctcttctgag
acttga
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