Panicum hallii (Hall's panicgrass): 112875303
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Entry
112875303 CDS
T07366
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phai03016
]
112875303
Enzymes [BR:
phai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
112875303
Transfer RNA biogenesis [BR:
phai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112875303
Prokaryotic type
112875303
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
112875303
NCBI-ProteinID:
XP_025794893
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All DBs
Position
9:complement(62687286..62691206)
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AA seq
515 aa
AA seq
DB search
MAAAATSSWLLRRPISSVLLARRATPRILRNTICYSSSASAPAAPPPSPPDTSAGDGGGG
MRWESARKKRVVLRVGYVGTEYRGLQKQRELSVDSTIESVLESATFKAGGILESNYGKLQ
KVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLASFINSNLPNNVRVFSILP
AQRSFDVRRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILKGFEGNHPFHNYT
ARAKYRKVLAGRHRRVKGAGSTLKSMPSEMGMEESSSEHDEDLNISSMIDSGVSEDNCMN
DIAKGSGNQVQIQARWLYEPDESDRLNASHFRDIITCSCGELQSSSGIQFVELTICGVSF
MLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLILGDNSFCTKNKEGR
IVRPGIQSINNSAEIRKGVEEFYKAALLPELAKFLDPTMPPWKEWVENLDRFASIQNSQL
DEVREAYRVWKADYDRVKMARKSAEAAHKVDKELN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcaacgtcgtcgtggcttctccggagacctatctcctccgtcctccta
gcgaggcgtgccaccccaagaatcctgcgcaacaccatctgctattcctcctccgcatcc
gcccccgccgcaccaccgccgtctccgcctgacacctccgccggcgatggaggcggcggg
atgagatgggagtcggcgcggaagaagagggtggtgctccgcgtcggctacgtcggcacc
gagtaccgaggccttcagaagcagcgggagcttagcgtggactcgaccatcgagtcagtc
ttggaatctgccaccttcaaggcggggggcattcttgagagtaattatggaaaactgcaa
aaggttgggtgggagaggagtagccgaactgataaaggggtacactcgctggctacaatg
atctcccttaaaatggaaatccctgatagagcgtgggagaatgatcctgatggcatatct
cttgccagttttattaactcaaatttgccaaacaatgtcagggtttttagtatcttgcct
gcacaaaggagttttgatgtaaggagggagtgcttataccgtgagtacttctatcttctt
cctgctgaaactattggaattaaagatggttgtagctccgaagaagtgcaagagcacttg
tcagaattcaacagcatactgaaaggtttcgagggaaaccatccatttcataattacact
gcacgtgccaagtacagaaaagttcttgcgggaagacaccgaagggtgaaaggtgcaggt
tcgacactgaagtccatgccctctgaaatgggtatggaagaaagctcttcagaacatgat
gaagacctgaatatttcatcaatgattgattctggtgtatcggaagacaattgtatgaat
gatattgccaaaggttctgggaatcaggtgcagattcaggctaggtggctatatgagcct
gatgagagtgataggctaaatgcttcacatttcagagatattatcacctgttcctgtgga
gaattgcagagttcatcaggaattcaatttgtggaattgaccatatgcggagtatccttc
atgctacatcagatccgaaagatggttggaactgcagtggcagtgaagcgtggattacta
cccaaagatatcattgaattgtctctagcaaagttttctagaatcgttctaccaatagcc
ccttcagaagttctgatccttggagataatagtttctgcacaaaaaacaaagaagggaga
attgttcgccctgggatccagtcaattaacaattcggcggaaatcaggaagggggttgag
gaattctacaaggcggctcttctgcctgagctagcgaaattcttggatccaactatgccg
ccgtggaaagaatgggtagagaacttggaccggttcgccagcatacaaaattcgcagctg
gatgaagttagggaggcctatagagtatggaaggctgattatgaccgagtgaagatggct
agaaagagtgccgaagctgctcataaggtggacaaggaactgaattga
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