Panicum hallii (Hall's panicgrass): 112875363
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Entry
112875363 CDS
T07366
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112875363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phai03400
]
112875363
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112875363
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
CCDC113_CCDC96_CC
DUF8156
DUF6381
Motif
Other DBs
NCBI-GeneID:
112875363
NCBI-ProteinID:
XP_025794973
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Position
9:5362335..5365064
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AA seq
278 aa
AA seq
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MAAATPAAAPRHSCAKLSVAVEDPKAAGGGAVFVRATWLPTRFSLAVTDGAGAWVADASD
AEVRLRAEQWDQPVAEYLALAERYLAFHQPDSTYSFHDAGKGNRRLSWTFERQGTKLEWR
WKLQPSPNTQQTIYGILDFLMDANIRLSEEVVRKTQSFDKLKQEAEKCLQQSERFNTEKA
EFEQATFSKFVGVLNSKKAKLRQLRDKVAELESADKPPKDEEEENSTDRTELFEEGSDKE
ASVHDEPSETGSGDPHSSPEKSAATSRGRGRGRKRANK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccacccccgcggcggcgccgaggcacagctgcgcgaagctctcggtggcg
gtggaggaccccaaggctgccggcggaggcgcggtgttcgtcagggccacgtggctcccc
acccgcttctccctcgccgtcacggacggcgccggcgcctgggtcgccgacgcctccgac
gccgaggtgcgcctccgcgccgagcagtgggaccagcccgtcgccgagtacctcgcgctc
gccgagcggtacctcgccttccaccagcccgactctacctactccttccacgacgccggc
aaaggcaatcgcaggctgtcatggacatttgaaagacaaggtaccaagttggaatggcgt
tggaagctccagccatcacccaacacgcagcagactatatatgggatcctggatttcctt
atggatgcaaatattcgcttgagtgaagaggttgttaggaaaacacaatccttcgacaag
ttgaaacaagaagccgagaagtgcttgcaacaaagtgaaagatttaatactgagaaggct
gagttcgagcaagccaccttttcaaagtttgttggtgtcttgaattcgaagaaggccaag
ctcagacagctccgggacaaggttgctgaactcgaatcagctgacaagcctccaaaggat
gaggaggaggagaactcgacagaccgaacagagctattcgaggaaggaagcgacaaagag
gccagtgtccatgatgaaccctccgagacaggcagcggtgatcctcatagctctcctgag
aaatctgcagccacctcccgaggaagggggagaggccgcaagagagcaaacaaatag
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