Panicum hallii (Hall's panicgrass): 112875372
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Entry
112875372 CDS
T07366
Name
(RefSeq) nuclear pore complex protein NUP58-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112875372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112875372
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112875372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
TRIM_CC
Flagellin_N
Motif
Other DBs
NCBI-GeneID:
112875372
NCBI-ProteinID:
XP_025794984
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All DBs
Position
9:4345470..4351094
Genome browser
AA seq
706 aa
AA seq
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MPGLDWDLNLDPDLQAAARRLSFSDADFPSSRRGLSDMKVPRLDPRIHATSPRKNRLPTI
NEKSSDELAMAQAPALEQCTWPPSSLGTAGWLYQERGETLTPTGGAPVATLLPLALPGSS
QSQQLLEAGAAARTLEQLRQEESLASFGEHQQRCQQASAMEAGLQQAWAAAAAAALPQSQ
VRMLYTVDGGAAGYETKWDELHPVCQGLLLQIEENIREYRDDSERLDQCSHFDDLSPFNF
EFDAGQIIQEAVSISTIMNREKISIESLMTVIKEIMCNTDFAIRSYVKLRPRFVRLSTGI
ANHSGSSDAQTDFSQLLTMAPSFHHCSSATRRPSPFVQQTVARFEDHLGECCKWILELEQ
LVQIKNDKTFAESLESLSKVMSNIHDYLIHVASKVEHIHQSAETMKTQYLKDQQCRGDLS
NPFHKANRREEAKQQATAGIIHPMLHLSPLGQPTTLVAVPMISSQLQQTSFPIVATSPSS
YPALPLPSVLPSFSMQTSPAPSTNPFSSSGSVLQSTPFGSLSTLELGSMPVSSLFRTGIP
SSATSLFSIPYGDNYNPGSLICSYRWNGSFRHQSYTFCWKEATQKKPLAVHFIFSFWRCH
GCALLSLTARGRQPREICDLNWGWGSCEEASPWQVGNHSTNQPLEAGQCFALRHSKVTSL
WRVKLVGRMCFRGRRLKWNRNRFFSGGGNRNAQKCSSSRMPRRQEL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcctcgattgggacctgaacctggaccccgacctgcaggccgcggccaggcgc
ctcagcttctccgacgccgacttcccctcctcccgccgcgggctctcggacatgaaggtg
ccgcgtctggatccgagaatccacgccacctcgcccagaaagaaccgtctcccgacgatc
aacgagaagagctccgatgaactagcgatggcgcaggcacccgccctcgagcaatgcacc
tggcctccgtcatctctggggacggctgggtggctgtaccaggagcggggagagacgctg
acgcccacgggcggtgcgcccgtggcgactttgcttccccttgcgcttcctgggtcatcg
cagtctcagcaattgctggaggcgggagcggcggcgagaacgttggagcaactgcgacag
gaggaatcgctggcgtcgtttggggagcatcagcaacggtgccagcaggcttcggccatg
gaggcaggtttgcagcaggcgtgggcggcggcggcggccgcggcgctgccgcagtcgcag
gtgcggatgctgtacacggtggatgggggtgccgccgggtacgagaccaagtgggacgag
ctgcacccggtctgtcaggggcttcttcttcaaatcgaggaaaatattagggagtacaga
gatgatagtgagcggttggatcagtgcagccactttgatgacctatcaccgttcaatttt
gaatttgatgctggtcagattattcaggaggctgtatctatttctaccatcatgaataga
gagaagatttcaattgagagcttaatgactgttatcaaagaaattatgtgcaacaccgat
tttgctatacgttcgtatgtaaagctgaggccacggtttgtgcgtttaagtactggaatt
gcaaatcactctggatcttctgatgctcagactgatttcagtcagctcttgactatggca
ccaagctttcatcattgcagtagtgctacaaggcggccttctccttttgtgcaacaaaca
gttgccaggtttgaggatcatcttggagaatgctgcaaatggattctagaactagaacag
cttgtccagattaagaacgataaaacctttgcagaatctttggaatctctgtcaaaagtt
atgtctaatatccatgactatctaatccatgtggcgtctaaggtggaacatattcatcag
agtgctgaaacaatgaagactcagtatctgaaggatcaacaatgcaggggtgatttgagt
aatccttttcacaaggcaaatagaagagaggaagctaaacaacaagcaactgctggaata
atccatccgatgttgcatctatcacctctaggccagccaacaacactggttgctgtgcca
atgatatcaagccagctacagcaaacttcattccccattgtagcaacttccccaagctct
tacccagctcttccgctgccttctgttttgccttcattcagcatgcaaacaagtcctgct
ccatcaaccaaccctttcagttcatccgggtctgtgttgcagtcaacaccatttggttca
ttatccacacttgaacttggatccatgccggtttcatctttgttcaggactggcatccca
tcttctgctacttcgcttttctcaataccatacggagataattataatcctggttctctt
atttgttcatataggtggaacggcagcttcagacatcaatcgtataccttctgctggaag
gaagccacccagaagaaaccgctagccgtgcatttcatcttctctttttggaggtgtcat
ggctgtgcgctgctctctcttacggctcgtgggcggcaaccacgtgagatctgtgacctg
aactggggatggggaagctgcgaagaagcatcgccctggcaagttggcaaccattcaacc
aaccaaccactggaggctggtcaatgctttgctttgaggcatagcaaagtgacgtcactg
tggcgcgtaaaactagtgggtcgaatgtgcttcaggggtcgtcgtctcaagtggaaccgg
aacaggttcttttccggtggtgggaatcggaatgctcagaaatgctcctcctctcgaatg
ccaagaaggcaagaactgtaa
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