Panicum hallii (Hall's panicgrass): 112875522
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Entry
112875522 CDS
T07366
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phai03000
]
112875522
03036 Chromosome and associated proteins [BR:
phai03036
]
112875522
Transcription factors [BR:
phai03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112875522
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112875522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
112875522
NCBI-ProteinID:
XP_025795183
LinkDB
All DBs
Position
9:complement(15114447..15127767)
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AA seq
1480 aa
AA seq
DB search
MNKDGILSDGKLKKMESVQPNGQHGDDDIIIIDSQSDENKAGAKTNIRDDLYKEHKEPVC
RTVDNNVNDEETSITDDDSEADSYEFFLRESDNEQASASEIDTEVPLTEEEVEELVYEFL
EVESKAAEAQESLEKESLDKIETEVRLELSERLQGDELESAVSTEMEQFQMQWENELDDL
ETRSSILLEQLDAAGVELPRLYKSIESQVPDVCETEAWKRRAHWAGSQVPEEANLSIKKA
DEYLQSCRPARRKHGRLLEEGASGFLAGKVPVGDGDSIEESWSSFNELIKSKENAGNTFG
SSNWASVYLASTPQEAAALGLQFPGVDEVEEIAEVDGVFDDIKGVDEVELSEEQRRKYRK
VKEEDDAKIMNCLQRRSKGKRVRGTKENLGKVSSCHEKPPLSENVILGAESDLPSSKKLK
TDENKVSIEILKRTCEDDDELFQKRLKTVIIESDDEMQIDSKPALQNDRECSSARVEKVV
DIIDLDLFPSQSPKLSDKSLPKAFKCTICAEMLNASDVHRHPVLDVTVCGPCRFLVIEKN
RLEDPVSGGYCTWCAQSELLQSCSSCKLLFCTNCLSKNLGEECSSEAKATGWQCCCCVPS
QLEILISECDKALCGVESSDSETSNPELSGPENNGPVSKRRMKKRIRRIMDDTELGEETK
RKIAMEKARQDHLKSMQEQSASKLRNENTSFRVPLEVSLEDAGDEHIVNLAREEDEEPVR
IPSSMSSKLKPHQVEGIRFMWENVIQSVKKVKSGDKGLGCILAHNMGLGKTFQVITFLYT
VMKCAQLGLRTALIVTPVNVLHNWRKEFSRWRPAELKPLRVFMLEDVARVKRPDLLTKWR
VKGGVLLIGYSSFRNLSLGKHVKDKNVANEIAYALQCGPDILVCDEAHMIKNRRADITLA
LKQVTTQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS
DDVKIMNQRSHILFEQLKGFVQRMSMNVLKNDLPPKKVFVITVKLSQLQRKLYRRFLDIH
GFSSSGYSEKSHSSFFAKYQTLAQVWNHPGLLQMAKEQRGNLRREDAVENFMMDESSSDD
NTETYLPNGEKQKDRADQQSKKSNFVNEESNWWEELLDENTYMEADYSGKMILLLDILSK
SSELGDKVLVFSQSLTTLDLVEFYLSKLQIKGKEGKHWKRGKDWYRLDGSTPSSDRQNLV
EMFNDPENARVKCTLISTRAGSLGINLHAANRVVLLDGSWNPTHDLQAIYRVWRYGQTKP
VYAYRLMAHRTMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHLFEFGEEELMEQN
ENGSTTVIEKPSTSNTIETSEPVDSLMLNLLSEQTRWIAGYHEHEALLQENEEERLTKEE
QDMALSEWEALRNAVRDPERKSNMTKVPTDPNLVRPVKAASRSRQPQQPKVNSNNQKKCN
NLTHLLTLRSHGTKAGCTTTCDECGQEICWETLNRDGRSR
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggatgggatactgtcagatggcaagctgaaaaagatggaatctgttcaacca
aatggacaacatggagatgatgatataataattattgactcccaaagtgatgaaaataaa
gccggagcaaaaactaacataagagacgatctctataaggagcataaggagcctgtgtgc
agaacagtggacaataatgtgaatgatgaagaaacatccattactgatgatgattcagag
gctgactcatatgaattctttctccgcgaatcagataatgaacaagcttcagcatctgag
atagacactgaggtacctctaactgaggaagaagttgaagaattggtttatgaatttctt
gaagttgagagcaaagcagcggaagcgcaagaatcacttgaaaaggagtcactggacaaa
attgaaactgaagtaagattggagttatccgagaggcttcaaggagatgagttagaatca
gctgtgtcaactgagatggagcaattccagatgcaatgggaaaatgaacttgatgatctg
gagacacgtagttccattctgctggaacaacttgatgctgctggagttgaacttcccaga
ctctataagtcaattgaaagtcaagttccagatgtttgtgaaactgaagcatggaagagg
agggcccattgggctggatctcaagtgcctgaagaagctaacctatccattaaaaaggct
gatgaatacctccagtcttgcagacctgcaaggagaaaacacgggaggttactggaggaa
ggtgctagcggctttcttgctggaaaagttcctgttggggatggtgattctattgaggaa
agttggagttcattcaatgaacttattaaatctaaggagaatgctggaaatacttttggt
agcagtaactgggcatcggtttatcttgcaagtaccccccaggaagctgctgcattaggt
ctccagtttcctggagttgacgaggtggaggagatagctgaagttgacggtgtttttgat
gatataaaaggtgtagatgaagtagagctttctgaggaacagagaaggaagtaccgaaag
gtgaaggaagaggatgatgcaaaaataatgaattgcctgcagcgtcgttcgaaaggaaaa
agggtgaggggcactaaggagaacctcggtaaggtctcatcatgccatgagaagcctcct
ctatcagaaaatgttattttgggtgcggaaagtgaccttccttcatctaaaaagcttaaa
actgatgaaaacaaagtttctattgagatattgaagcgcacatgtgaagatgatgatgag
cttttccagaagagactgaaaactgtgataatagaaagtgatgatgagatgcagatagat
agcaagccagctttacaaaatgatagggaatgtagctcagcaagagttgaaaaggtggtt
gatatcattgatcttgatctcttcccatcacaaagccctaagctcagtgataaaagtttg
cctaaagctttcaaatgtactatttgcgctgaaatgctgaatgcctctgacgtgcatcgc
cacccagtactggatgttactgtttgtggaccatgcagatttcttgtgatagagaagaat
cgtcttgaggatcctgtatctggtggttattgcacttggtgtgcacaaagcgaactactt
caaagttgtagttcttgtaagctgcttttctgtacaaattgtttgtcaaagaatttaggt
gaagaatgctcatcagaagctaaagccactggttggcagtgttgctgctgtgtacccagt
caactggaaattttaatttctgaatgtgacaaggccctctgtggtgttgaatcttctgat
tcagagaccagcaacccagagctttctggaccggaaaacaatggtcctgttagcaagcga
agaatgaagaagaggattagaagaattatggatgatacagaacttggcgaggaaactaag
cgcaaaattgcaatggagaaggcaaggcaagaccatttgaagtccatgcaagagcaatct
gccagcaagttaaggaatgagaatacttccttcagagtcccattggaagtctctttagag
gatgctggggatgagcatatagtcaaccttgccagggaggaagatgaggaacctgttagg
attccaagcagcatgtcttctaaactgaagcctcatcaggtagaaggaataaggtttatg
tgggaaaatgtgattcaatctgttaaaaaggtgaaatccggggataaaggtctcggctgc
attttggcgcataatatgggccttgggaaaacctttcaggttattacattcctctacact
gttatgaaatgtgctcaattgggattgcgcacagcacttattgttacccctgttaatgtt
cttcataactggaggaaagagtttagcagatggcgtccagcagaactgaagcctcttcgt
gtttttatgttggaagatgttgcgagggtgaaaagaccagatttactaaccaaatggcga
gtaaaaggcggagtgcttctcatcgggtattcatcgtttaggaacttatcccttggaaag
catgtgaaggacaaaaatgttgcaaacgaaattgcttatgctttgcagtgtggaccagac
attcttgtatgcgatgaagcacatatgataaagaatcgtagggctgacattacactggct
ttgaaacaagtaacgacacagagaagaattgcgttaactggatctccattgcagaataat
ttgatggaatattattgtatggttgattttgtcagggaaggctttcttgggagtagccat
gaattccgaaacaggttccagaaccccattgaaaatgggcaacacacaaattcaacatca
gacgatgtaaagatcatgaaccaacgatcacacattttgtttgaacaactgaaaggtttt
gtccagcggatgagcatgaatgttttgaagaatgatctaccacctaagaaggtttttgtt
attactgtaaagctatctcagctgcagaggaagctatacagaagattcttggatattcat
ggtttctcaagtagtggttattcagaaaaatctcatagttccttctttgccaagtaccaa
acattagcccaggtatggaatcatccagggctcctccagatggctaaagaacagagagga
aatttgcgtcgcgaggatgctgttgagaactttatgatggatgagagttcaagtgatgat
aatactgaaacatacttgcctaatggagagaagcagaaggatagagctgatcagcagtcc
aaaaaaagcaactttgtgaatgaggaaagtaactggtgggaggaacttctagatgagaat
acttatatggaggcagattacagtggcaaaatgattttgctccttgatatcctgtcaaaa
agttctgaattgggtgacaaggtattggtgtttagccagagcttgaccactctggattta
gtggagttttatctgtcaaaattgcaaatcaaaggaaaagaaggcaaacattggaagcga
gggaaggattggtataggcttgatgggagcactccatcttctgatcgacagaatcttgtg
gagatgtttaacgaccctgaaaatgcaagagtaaaatgcacgttgatatcaactcgtgct
ggatctctgggcattaaccttcatgctgcaaatcgtgtggttcttctggatggatcctgg
aatccaacacatgatctgcaagccatttatcgtgtttggaggtatggccagaccaaacct
gtatatgcttaccgcttaatggcacatcgaacaatggaagagaaaatatataagcggcag
gtgacaaaagaaggcctcgcggcaagggtggtggatagacagcaagtttcaagaaccatc
tccaaagaagagatgttgcatctttttgaatttggtgaagaggaattgatggaacagaat
gagaacggttctacaaccgtgattgagaagccatccacttccaacaccattgaaacttcc
gaacctgtggacagcctcatgctgaacctactcagtgaacagactcggtggattgcaggt
taccatgaacatgaagctctcctccaagaaaatgaagaagaaaggcttacaaaggaggaa
caagacatggccttgtcggagtgggaggctttgaggaatgcagtacgtgatcccgagaga
aaatcaaacatgactaaggttccaacagatcccaaccttgtgcggccagttaaggctgct
tcaagaagccggcagccgcagcaacctaaggttaactcaaacaaccaaaagaagtgcaac
aacttaacccacttgctgactctaagaagccatggcacgaaagcagggtgcacgacaacc
tgtgatgaatgtggccaggagatttgttgggagacactaaatagagatggtagatcgaga
tga
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integrated database retrieval system
