Panicum hallii (Hall's panicgrass): 112875559
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Entry
112875559 CDS
T07366
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112875559
03012 Translation factors [BR:
phai03012
]
112875559
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112875559
Translation factors [BR:
phai03012
]
Eukaryotic type
Initiation factors
eIF-3
112875559
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
RRM_1
WD40_WDHD1_1st
ANAPC4_WD40
Tricorn_2nd
Beta-prop_ELP1_1st
WD40_Prp19
Beta-prop_Aladin
Es2
BORG_CEP
Motif
Other DBs
NCBI-GeneID:
112875559
NCBI-ProteinID:
XP_025795225
LinkDB
All DBs
Position
9:54774771..54779313
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AA seq
720 aa
AA seq
DB search
MALAISMEGIEARARELGVDLSAVDLDSITLPAGEDFGILSDDEEILRNEDPPELEMGLS
NIIVVDNLPVVPPEKFDKLENVIRKIYSQIGVIKENGLWMPVNPETKKTYGYCFIEYNTP
QEAELAREKTNGYKLDKSHIFAVNMLDDFEKYMKVPDTWTPAEIKPYTPGENLLKWLTDE
KARDQFVIRAGTLTEVYWNDARKQAPELVFQKQYWTDSFIQWSPLGTYLATVHRQGSQVW
GGENGFERLMRFAHPMVKLIDFSPGERYLVTYSSHEPSNPRDTHRVVLNIFDVRTGKVMR
DFKGSADEFTTGGNVGVSGVSWPIFRWGGGKDDKYFARLGKNVISVYETDTFSLLDKKSL
KVENVVDFSWSPTDPIISLFVPEMGGGNQPARVSLVQIPGKEELRQKNLFSVSDCKMYWQ
NNGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRF
AIIHGDGPRPDVSFYTMRTANNTSRVSKLTTLKAKQANALFWSPAGRFIVLAGLKGFNGQ
LEFYNVDELETMSTGEHFMATDIMWDPTGRYLATAVTSVHEMENGFQIWSFNGKHLYKVS
KDHFYQFIWRPRPPSLLTPEKEEEISKNLKKYSKKYEQEDQDAFNQLSEQERKRRTQLQE
EWDSWVAKWKQMHEEERAYRRELRDGEASDEEEEYEAKEVEVEEVVDVTEEVLAFDLDQE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcaatctccatggaaggaatcgaggcgcgtgcgcgggagctcggggtggac
ctctccgccgtcgatctggactccatcaccctcccggccggcgaggacttcggcatcctc
agtgatgatgaggaaatacttcggaatgaggaccctcctgaacttgaaatgggtttatcc
aacattattgtagtggacaatctgccggttgttcctccagaaaaatttgacaagcttgag
aatgtaattcgcaagatatacagccaaattggagtgataaaagaaaatggtctatggatg
ccggtaaacccagagacaaagaagacttatggctactgtttcattgagtataatacccct
caggaagctgagcttgcaagggaaaaaaccaatgggtacaagctcgacaagtctcatatc
tttgcagttaatatgcttgatgactttgagaaatacatgaaggttcctgacacgtggacg
cctgcagaaataaagccatacactcctggagaaaatcttctgaaatggctaactgatgaa
aaggcccgagatcaatttgtcatccgtgctggtacattgacagaagtttactggaatgat
gctagaaagcaggcacctgaacttgtgtttcaaaagcagtactggacagacagtttcatt
cagtggtcccctcttggaacatacttggcaacggttcataggcaggggtcacaggtgtgg
ggtggtgaaaatggcttcgagcggttgatgcgttttgctcatccgatggtcaaattaatt
gacttttctcctggtgagagatatttggtcacatacagcagccacgagcccagcaaccct
agagacacacatagggttgtcctaaatatctttgatgtaaggactggaaaagttatgcga
gacttcaagggaagtgctgatgaatttaccactggcgggaatgttggtgtttctggtgtt
tcatggcccatattcaggtggggtggtggaaaggacgataagtatttcgcaaggcttggg
aagaacgtaatatcggtctatgaaacagatacgttctcccttcttgacaagaagtcattg
aaggtagaaaatgtagtggacttcagctggtctcccactgatccaatcatatccttgttt
gtgcctgaaatgggtggtggcaaccagccagcaagggtgagccttgtgcaaattccaggc
aaagaggaactgcggcagaaaaaccttttcagtgtcagtgactgcaagatgtattggcag
aataatggagaatatcttgctgtccaggttgatagatacacaaaaacaaagaagagcacc
tacactggatttgagttgtttagaattaaggagagagacatcccaattgaggtccttgaa
ctcgagaataagaatgacaagatcattgcatttgcctgggaacctaaaggccatcgcttc
gctatcattcatggtgatggccctaggcctgatgttagtttttacaccatgcgaacagca
aataacactagccgtgtgtcgaagctcaccactctcaaggccaagcaagctaacgcgctg
ttttggtctcctgctggtcgcttcattgttcttgctgggctgaagggattcaatggacag
ctggaattctacaatgttgatgagcttgaaacaatgtcaacaggagagcattttatggca
acagacataatgtgggatcctactggaagatatcttgcaactgcagttacctcagtccat
gaaatggagaatggatttcaaatatggtctttcaatggcaagcacctttacaaggtgtca
aaggatcacttctatcagtttatttggcggccaagaccaccatcacttttgactcctgag
aaggaagaggagatttcgaagaacctgaagaagtacagtaagaaatacgaacaagaagac
caggatgcgttcaaccagctgagcgagcaggagcgcaagaggcggacgcagctccaggaa
gaatgggactcgtgggttgccaagtggaagcagatgcatgaggaggagcgtgcatacagg
agggagctcagggatggagaggccagcgatgaggaggaagagtacgaggccaaggaggtt
gaggtggaggaagtggtggacgtcactgaagaagttctcgcatttgacctggatcaggag
tga
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