Panicum hallii (Hall's panicgrass): 112875603
Help
Entry
112875603 CDS
T07366
Name
(RefSeq) chaperonin CPN60-1, mitochondrial-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112875603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112875603
03110 Chaperones and folding catalysts [BR:
phai03110
]
112875603
03029 Mitochondrial biogenesis [BR:
phai03029
]
112875603
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112875603
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112875603
Messenger RNA biogenesis [BR:
phai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112875603
Chaperones and folding catalysts [BR:
phai03110
]
Heat shock proteins
HSP60 / Chaperonin
112875603
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112875603
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112875603
Exosomal proteins of other body fluids (saliva and urine)
112875603
Exosomal proteins of breast cancer cells
112875603
Exosomal proteins of colorectal cancer cells
112875603
Exosomal proteins of bladder cancer cells
112875603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
112875603
NCBI-ProteinID:
XP_025795291
LinkDB
All DBs
Position
9:71516206..71521523
Genome browser
AA seq
568 aa
AA seq
DB search
MYCATASLASKARRAGCSARQVGSRLAWSRNYAAKDIKFGVQARALMLRGVEELADAVKV
TMGPKGRTVIIEQSFGAPKVTKDGVTVAKSIEFSDRVKNVGASLVKQVANATNDTAGDGT
TCATILTKAIFTEGCKSVAAGMNAMDLRRGIVMAVDAVVTNLKGMARMISTSEEIAQVAT
ISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVLEGMKLDRGYISPYFITNQK
NQKCELNEPLILIHNKKISNVQAMVKVMELALQKQKPLLIVAGDLQSEALGTLILNKLRA
GVKVCAVKAPGFGDTKKANLQDLAILTGAEVITEELGMNLENFEPQMFGTCKKVTISKDD
TIILDGAGDKKAIEERAEQLRSAIEQCTSDFDKEKLQERLAKLSGGVAVLKIGGASETEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKDLDKLQTANFDQKIGVKIIQNALKA
PVQTIASNAGVEGAVIAGKLLEQENTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALMDAA
SVSSLMTTTESIIVETPKEESNAPPMEY
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtactgcgcaaccgccagcctcgcctccaaggcccggcgagccgggtgcagcgctcgc
caggtggggagcaggttggcctggagcagaaactatgctgccaaggacatcaagtttggc
gtgcaagcccgggccttgatgctgaggggtgttgaggaattggctgatgcggtcaaagtt
acaatgggccccaagggccgtactgtcattattgagcaaagctttggcgctcctaaagtt
acaaaggatggagtgaccgttgccaagagcattgaattcagtgacagagtaaagaatgtt
ggtgcaagccttgtaaagcaggttgctaatgctactaatgatacagctggggatggtact
acatgtgctactattctgacaaaggctatattcactgagggttgcaagtccgtagctgct
ggaatgaatgccatggatctgagacgtggtatcgtaatggctgttgatgctgtggtcaca
aacctaaaaggcatggcgagaatgatcagcacatcagaggaaatagcacaggtggctact
atatcagccaatggggaaagggaaattggtgagctaattgcaaaggctatggagaaggtc
ggtaaagagggagttatcaccattgcggatggcaacactctctataatgagcttgaagtt
ctggaaggcatgaagcttgacagaggttacatctctccatactttattaccaaccaaaag
aaccagaaatgtgaattaaatgaacccttgatcttgatacacaacaagaaaatatcaaac
gtgcaagcaatggtcaaagtgatggagttagctctacagaagcaaaaacctctgcttatt
gttgcaggagatttacaaagtgaagcattgggtaccctgattcttaacaagcttcgtgca
ggcgttaaggtctgtgcggtcaaagctcctggtttcggggataccaagaaagctaacttg
caggaccttgctatccttaccggggcagaagtcataactgaagaacttgggatgaatctt
gagaactttgagcctcagatgtttggcacttgcaagaaggttacaatatcgaaagatgac
actatcatcctggatggagctggagataagaaagcaattgaagagagagctgagcagctg
agatcagcgattgagcaatgcacttctgactttgataaggaaaagctacaagagagattg
gcaaagctttctggtggtgttgctgttctaaagattggtggagcaagtgaaacagaagtt
ggtgagaagaaggatagagtgactgatgcactaaatgcaaccaaagctgcagttgaggag
ggcattgtgccaggtggtggcgttgcccttctctacgcgtcaaaagacctggataaattg
cagactgcaaactttgaccaaaagattggtgttaaaatcatccaaaatgctttgaaggcc
ccagtgcagactattgcttcaaatgcaggcgtcgaaggagctgttattgctggcaagctt
ttggaacaggaaaacactgatcttggctatgatgcagctaaaggtgaatatgtggacatg
gtgaaggctggtatcattgacccgcttaaagtgatcaggacagccctgatggacgctgca
agtgtgtcatctctgatgactaccacagaatctatcatcgttgagaccccgaaggaagag
agcaatgcgccaccaatggaatactga
DBGET
integrated database retrieval system
