Panicum hallii (Hall's panicgrass): 112875607
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Entry
112875607 CDS
T07366
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112875607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112875607
03110 Chaperones and folding catalysts [BR:
phai03110
]
112875607
03029 Mitochondrial biogenesis [BR:
phai03029
]
112875607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112875607
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112875607
Messenger RNA biogenesis [BR:
phai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112875607
Chaperones and folding catalysts [BR:
phai03110
]
Heat shock proteins
HSP60 / Chaperonin
112875607
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112875607
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112875607
Exosomal proteins of other body fluids (saliva and urine)
112875607
Exosomal proteins of breast cancer cells
112875607
Exosomal proteins of colorectal cancer cells
112875607
Exosomal proteins of bladder cancer cells
112875607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
YIEGIA_cap
Motif
Other DBs
NCBI-GeneID:
112875607
NCBI-ProteinID:
XP_025795306
LinkDB
All DBs
Position
1:308943..313829
Genome browser
AA seq
598 aa
AA seq
DB search
MASTFGTCRLNKPATAAFATNKTLLLSPPVVSLPRQMKMRPQRKCRLTVNAAKELHFNKD
GSAIRKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKIVAAGANPVQITRGIEKTAKALVN
ELQKMSKEVEDSELADVAAVSAGNNYEIGNIIAEAMSKVGRQGVVTLEEGKSAENNLYVV
EGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKINNARDLITILEDSIRGGYPILIV
AEDIEQEALATLVVNRLRGALKVAAIKAPGFGERKSQYLDDIATLTGGTVIRDEVGLSLE
KADKEVLGTAAKIVVTKDSTTIVGDGTTQEEVNKRVMQIKSQIEATDQEYEREKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAII
ETLENDEQRVGAEIVRKSLSYPLKLIAKNAGVNGSVVIEKVLANENFRYGYNAATGNYED
LMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKVPEQAPAANPMGGGGSGFGF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgttcgggacatgtcgcctcaacaagccagcaactgctgcttttgcgacc
aacaagaccctcctcctttcgcccccggttgtttccctcccacgccaaatgaaaatgagg
ccccagaggaagtgccgtctcacagtaaatgcagcaaaggagctccatttcaacaaggat
ggctcggctatcaggaaacttcagaatggggtcaataagcttgcagatctcgttggggtt
actcttggtccaaaaggacgaaatgtagtccttgagagcaagtatggctcacctaaaatc
gtcaatgatggagtcactgtcgcaaaggaggttgagctggaggaccctgttgaaaacatt
ggagctaaattggtccgccaagctgctgctaaaacaaatgatttggctggtgatgggaca
accacttcggtcgtccttgctcaagggatgattactgagggtgtaaagattgtagctgct
ggtgctaatccagtgcagatcacccggggtattgagaaaacagccaaagcactagtaaat
gaactccaaaagatgtccaaggaggttgaggatagtgagctggctgatgttgctgcagta
agcgctggaaataactacgaaattgggaatattatagctgaggctatgagcaaggttgga
cggcagggagtggtcacccttgaagaaggaaagagtgctgaaaataacctctatgttgtt
gagggaatgcagttcgatcgtggttatatttctccctactttgtgactgacagtgaaaaa
atgacagtggagtatgagaattgcaagctgctccttgtggacaagaaaattaacaatgca
agagatcttatcactattctggaggactctattagaggtgggtatccaattctgatagtc
gcagaggatattgagcaggaagctcttgcaacccttgtggttaataggcttagaggtgca
ttgaaagttgctgctatcaaggcccctggctttggagagcgcaagagtcaatacctggat
gacattgctactctcactggaggcactgtcatcagagatgaagttgggttgtccctagag
aaggcagacaaggaggtcctaggaactgctgccaagattgtagttactaaggattcaaca
acaatagttggagatggtactacacaggaggaagtaaacaaaagggtgatgcaaatcaag
agccagattgaggcaactgatcaagaatatgagagagaaaagctcaacgagaggattgct
aaactgtctggtggtgttgctgttattcaggtgggagcacagacagaaactgagcttaag
gaaaagaaactgagggttgaagatgcccttaatgctacaaaggcagcagttgaggaaggc
attgttgtaggtggtggctgtacccttttaaggcttgcatcaaaagttgatgccattata
gaaacccttgagaatgatgaacagagggtcggggctgaaattgtaaggaagtccttgagc
tatccacttaaattgattgcaaagaatgcgggtgttaatggcagtgtggttatcgagaag
gttcttgccaatgagaacttcaggtatggttacaatgcagctacagggaactatgaggat
ttgatggctgctggtattattgatcccaccaaggttgtgaggtgttgcttggagcatgct
gcctcagtggcaaaaactttcatcacttctgatgctgttgtggttgacatcaaggtgccc
gagcaagcacctgctgcaaacccaatgggtggtggtggctcaggttttggattctag
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