Panicum hallii (Hall's panicgrass): 112875716
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Entry
112875716 CDS
T07366
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112875716
03015 mRNA surveillance pathway
112875716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112875716
03041 Spliceosome [BR:
phai03041
]
112875716
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112875716
Spliceosome [BR:
phai03041
]
Complex C
Other components
EJC/TREX
112875716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
112875716
NCBI-ProteinID:
XP_025795452
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All DBs
Position
9:7397017..7401501
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AA seq
413 aa
AA seq
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MAAATEKTAEDIRRELQELQRQHREITERLRDPRGLRRGAAGPGPGPGPGGSRPLRGFVR
PAPGAESGDQPAQKRRLLSAVVKVDGAETNEEGEKAAEAEGREEGSGAAEGGDRRAVSNG
NFRRDGSLRMPRRVDYNSLPEPAPRELPKNEDPNMVRRNKRMLGQLLVGTLEKFQQEDKK
LSNSEAYLRRSETQRKAEQKVREESERLRQQEREQIAEKRKRDMMLRARVAAKAEEKRLE
LLYIQWTEHHKKLSNFLRTKAEPPIYYMPAKPIIDDPTVIEQNKEKVFEEWKSMRRAELT
QFQKQVEEQYLSNVERQLERIQNARNARRANGPANMQEMDKELDTHRAEHGPKTRRVPEE
GGNDEDEDAEDMAAEDELMEEVLGINDGINEDPSKPSEEAVTDGGETAPEAAQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgacggagaagacggcggaggacatccgccgcgagctccaggagctccag
cgccagcaccgcgagatcaccgaacgccttcgcgatccccgcggccttcgccgcggcgcc
gccggccctggtcctggacctggacccggggggtcccgcccgctccgcggcttcgtgaga
cccgcaccaggtgcggaatcgggagaccaacctgcgcagaagcggcggctgctatctgcc
gtggttaaggtggatggcgctgaaactaacgaggaaggtgaaaaggctgctgaggcagag
gggcgtgaagagggttcaggtgctgctgaaggcggtgacaggagggctgttagcaatggt
aacttcaggagggatgggagcctgcggatgccaaggagggtggactataattcccttcca
gagccagctccaagggagcttcccaagaatgaggacccaaatatggtgagaaggaataag
aggatgttgggccagcttcttgttggtacattagagaaatttcagcaagaggacaagaaa
ttatccaactctgaggcttatctgcgcagatcagagacgcagcgaaaggctgagcaaaag
gttcgtgaggaaagtgaaaggttgcgacagcaggaacgagagcaaattgcagagaagcgt
aagcgtgacatgatgcttcgcgctcgtgtagctgctaaggcagaagaaaagaggttggag
ctgttgtacattcagtggactgagcatcataaaaagctgtccaatttcttaaggacaaaa
gctgaaccacctatttactatatgccagctaaaccaatcattgatgatcctactgttatt
gagcagaataaggaaaaggtatttgaagaatggaaatctatgcgcagagctgagctgact
cagtttcaaaagcaagttgaggagcaatatctctccaatgttgagaggcagttggaaaga
atccagaatgcccggaacgctcggagagcaaatgggcctgctaacatgcaagagatggac
aaggagctggacacacacagagcggagcatggtcctaagactcggcgagttcctgaggag
ggtggcaatgatgaggatgaggatgcagaggatatggcagcggaagacgagctgatggaa
gaagttctgggcatcaacgatgggatcaacgaggatccatccaagccttccgaagaagct
gtcactgatggtggtgagactgcacctgaggcggcacaatag
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