KEGG   Panicum hallii (Hall's panicgrass): 112875716
Entry
112875716         CDS       T07366                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03013  Nucleocytoplasmic transport
phai03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112875716
   03015 mRNA surveillance pathway
    112875716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phai03019]
    112875716
   03041 Spliceosome [BR:phai03041]
    112875716
Messenger RNA biogenesis [BR:phai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112875716
Spliceosome [BR:phai03041]
 Complex C
  Other components
   EJC/TREX
    112875716
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 112875716
NCBI-ProteinID: XP_025795452
LinkDB
Position
9:7397017..7401501
AA seq 413 aa
MAAATEKTAEDIRRELQELQRQHREITERLRDPRGLRRGAAGPGPGPGPGGSRPLRGFVR
PAPGAESGDQPAQKRRLLSAVVKVDGAETNEEGEKAAEAEGREEGSGAAEGGDRRAVSNG
NFRRDGSLRMPRRVDYNSLPEPAPRELPKNEDPNMVRRNKRMLGQLLVGTLEKFQQEDKK
LSNSEAYLRRSETQRKAEQKVREESERLRQQEREQIAEKRKRDMMLRARVAAKAEEKRLE
LLYIQWTEHHKKLSNFLRTKAEPPIYYMPAKPIIDDPTVIEQNKEKVFEEWKSMRRAELT
QFQKQVEEQYLSNVERQLERIQNARNARRANGPANMQEMDKELDTHRAEHGPKTRRVPEE
GGNDEDEDAEDMAAEDELMEEVLGINDGINEDPSKPSEEAVTDGGETAPEAAQ
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggccgccgcgacggagaagacggcggaggacatccgccgcgagctccaggagctccag
cgccagcaccgcgagatcaccgaacgccttcgcgatccccgcggccttcgccgcggcgcc
gccggccctggtcctggacctggacccggggggtcccgcccgctccgcggcttcgtgaga
cccgcaccaggtgcggaatcgggagaccaacctgcgcagaagcggcggctgctatctgcc
gtggttaaggtggatggcgctgaaactaacgaggaaggtgaaaaggctgctgaggcagag
gggcgtgaagagggttcaggtgctgctgaaggcggtgacaggagggctgttagcaatggt
aacttcaggagggatgggagcctgcggatgccaaggagggtggactataattcccttcca
gagccagctccaagggagcttcccaagaatgaggacccaaatatggtgagaaggaataag
aggatgttgggccagcttcttgttggtacattagagaaatttcagcaagaggacaagaaa
ttatccaactctgaggcttatctgcgcagatcagagacgcagcgaaaggctgagcaaaag
gttcgtgaggaaagtgaaaggttgcgacagcaggaacgagagcaaattgcagagaagcgt
aagcgtgacatgatgcttcgcgctcgtgtagctgctaaggcagaagaaaagaggttggag
ctgttgtacattcagtggactgagcatcataaaaagctgtccaatttcttaaggacaaaa
gctgaaccacctatttactatatgccagctaaaccaatcattgatgatcctactgttatt
gagcagaataaggaaaaggtatttgaagaatggaaatctatgcgcagagctgagctgact
cagtttcaaaagcaagttgaggagcaatatctctccaatgttgagaggcagttggaaaga
atccagaatgcccggaacgctcggagagcaaatgggcctgctaacatgcaagagatggac
aaggagctggacacacacagagcggagcatggtcctaagactcggcgagttcctgaggag
ggtggcaatgatgaggatgaggatgcagaggatatggcagcggaagacgagctgatggaa
gaagttctgggcatcaacgatgggatcaacgaggatccatccaagccttccgaagaagct
gtcactgatggtggtgagactgcacctgaggcggcacaatag

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