Panicum hallii (Hall's panicgrass): 112875795
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Entry
112875795 CDS
T07366
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112875795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112875795
Enzymes [BR:
phai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112875795
Ubiquitin system [BR:
phai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112875795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
Prok-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112875795
NCBI-ProteinID:
XP_025795553
LinkDB
All DBs
Position
9:complement(9342798..9345599)
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AA seq
280 aa
AA seq
DB search
MEPKGETKVDGVRMAMGALDCPVCYEPLEPPIFQCGVGHLICKLCYARLEKCPLCTRTAF
ERCYGMERVVKSVEVPCCFANNGCTKKIAYFNKKRHEKACRHGLCFCPEPGCGFTGPVVA
LANHVATRHKWPSIKFKYFEQFNLPLQPGPRVLRAPDGNVFLMNLTPAEPLGHTVSLVCI
QPEATDSRFGCSMVFSCFTGHHQISTLDAVRSSSLSDGMPKDFFCVVPKARGTDISLRTT
IDNELVYDDEDEQEDEDDDDESYDEDEDELEDDSDECLMI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaaggggaaactaaggtggatggagtgagaatggcaatgggtgccttggac
tgccccgtctgttatgagccccttgagcctccgattttccagtgtggtgtggggcatttg
atctgcaaattatgctacgccaggctcgagaagtgccccctatgcacaagaactgccttt
gagcgctgctacggcatggagcgtgttgtcaaatccgttgaggttccttgttgctttgcc
aacaacggatgcaccaagaagatcgcctacttcaacaagaaaaggcacgagaaggcgtgc
cggcatgggctgtgcttctgcccggaacccggctgcggcttcactgggccagtggtggcg
ctggcgaaccatgtcgccacccgccacaagtggccgtccataaagttcaagtactttgag
cagttcaatctccccctccagccaggcccacgcgtgctccgcgccccggacggcaatgtt
ttcctcatgaacttgacgcccgcggagcccctggggcacacagtctccctcgtctgcatc
cagccggaggccacagactcgaggttcgggtgctcgatggtcttctcgtgcttcacgggc
caccaccagatctcaacgctggatgccgtgagaagctcgtccctgtctgatgggatgcca
aaggacttcttctgcgtcgtgcccaaggctagaggcactgatatctctctccgaaccacc
atagataacgagttggtgtatgatgacgaggacgagcaggaggatgaggatgatgatgat
gagagctacgacgaggatgaggatgagttagaagatgattccgacgaatgtctgatgatc
tag
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integrated database retrieval system
