Panicum hallii (Hall's panicgrass): 112875919
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Entry
112875919 CDS
T07366
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112875919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112875919
04147 Exosome [BR:
phai04147
]
112875919
04090 CD molecules [BR:
phai04090
]
112875919
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112875919
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112875919
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112875919
CD molecules [BR:
phai04090
]
Proteins
112875919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_22
AAA_16
AAA_30
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
112875919
NCBI-ProteinID:
XP_025795712
LinkDB
All DBs
Position
9:65243450..65251940
Genome browser
AA seq
1413 aa
AA seq
DB search
MVPTGLFGWASPHVQPLTPVSEVSEPPESPSPYGDGPAGDAGVGAREGEGTGAGEEEVEE
DEVEPPPAAVSFWRLFEFADGVDWALMAAGALAAAAHGAALVVYLHYFGRALNLLDSERV
ESALHGRSDELLHRFKEHALYIVYIAAGVFIAGWIEVSCWILTGERQTAVIRSKYVQVLL
NQDMSFFDTYGNNGDIVSQVLSDVLLIQSAISEKVGNYIHNMATFVGGLIVGLLNCWQIA
LLTLATGPLIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKY
SYATSLQATLRYGILISLVQGIGLGFTYGLAICSCALQLWVGRHLIHKRKADGGEVVVAL
FSVILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTSSANQEGITLPQVQGNIEFRNV
YFSYLSRPEIPILSGFFLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGEN
IKNLKVEWLRSQIGLVTQVPALLSLSIRENIAYGRSATFDQIEEAAKTAHAHGFISSLEK
GYETQVGRAGIALTDEQKIKISIARAVLSNPSILLLDEVTGGLDFEAEKAVQEALDVLML
GRSTIIIARRLSLIKNADYIAVMEEGHLVEMGTHDELVNLDGLYAELLRCEEATKLPKRM
PTKNSRERKSLQIEDASVSQYFQESSSPKMTKSPSLQRTHGMLQFWRSDTNRNSHDSPKD
RSPPSEQTVDNGIPMVAIEAERVPSIKRQDSFEMKLPDLPKVDVHPIQRQSSKNSEPDSP
ISPLLTSDPKNERSHSQTFSRPQSERDDASSEHSELDEVQHQKPPSFWRLASLSIAEWPY
ALLGTIGAAIFGSINPLLAYTIALIVSAYYHIDTNDMRHEVNRWCLFIVGMGVITVLVNW
LQHFYFGIMGEKMTERIRRMMFSAMLRNEVGWFDKEENNADTLSMRLANDATFVRAAFSN
RLSIFIQDTAAVSVALLIGMLLGWRVALVALATLPVLVISAIAQKLWLAGFSRGIQEMHR
KASLVLEDAVRNIYTVVAFCAGNKIMELYILHLGKILKQSLVQGLAIGFGFGLSQFLLFA
CNALLLWYTAISVDQQRLTIATGLKEYILFSFASFALVEPFGLAPYILKRRKSLMSVFEI
IDREPKIDPDDTTGLKPPNVYGSIEFKNVDFSYPARPEILVLSNFNLKVSGGQTVAVVGV
SGSGKSTIISLIERFYDPVSGQVLLDGRDLKSFNLRWLRSHMGLIQQEPVIFSTTIRENI
IYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN
APILLLDEASSAIESESSRVVQEALDTLVMGNKTTILIAHRAAMMKHVDNIVVLNGGRIV
EQGTHDSLMDQNGLYVRLMQPHFGKGLRQHRLM
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgacggggctgttcgggtgggcgtcgccgcacgtgcagccgctcacgcccgtg
tccgaggtctccgagccgccggagtcgccgtcgccgtacggggacggaccggcgggggat
gcgggcgtgggggcgagggagggggaaggcaccggcgccggcgaggaggaggtggaggaa
gacgaggtcgagccgccgcccgcggccgtgtcattctggaggcttttcgagttcgccgat
ggggtcgactgggcactcatggctgctggggcgctcgctgctgccgcgcatggtgcggcg
ctcgttgtgtacctgcactacttcgggagggcccttaatttgctcgactctgagcgggtt
gagtcagctctccatggacgcagcgatgagctgctccaccgatttaaggagcatgccttg
tatatcgtctatatagctgctggtgttttcatcgcaggatggatagaggtatcatgctgg
attctcactggggaacggcagactgctgtcatcagatcaaaatacgttcaggttttgcta
aaccaagacatgagcttctttgatacatatggtaacaacggtgatatagtcagtcaagtg
ctcagtgatgtattgctcattcagtcagctataagcgagaaagttgggaactacatacac
aatatggctacatttgttggtggtctcattgttggccttctcaattgttggcaaatagca
cttctaactcttgccactggacccttgattgttgcagcaggaggaatatctaacatattc
cttcataggctggctgaaaacattcaagatgcatacgccgaagcggctagcattgctgaa
caggctgtctcatacatcaggacactgtatgcttttacaaatgaaactcttgcgaagtac
tcctatgctacctcacttcaagccacactgagatatggaattttgataagccttgtccaa
ggaattggccttggatttacgtacggacttgccatttgctcttgtgctttgcaactttgg
gttggaagacatctgatccataaacgaaaagctgatggtggtgaagttgtggtagcttta
ttctctgtaattctgagcggccttggtttgaatcaagcagctacaaacttctattcattt
gagcaaggacgcattgctgcttatagactatatgagatgattagtcgttcaacttccagt
gccaatcaagaagggatcaccttaccccaagtgcaggggaatattgaatttagaaatgtg
tattttagctacctgtctcgtccagaaattccaatattaagtggattcttcctcactgta
ccagcgagaaaaactgttgcacttgttggtagaaatggctcagggaaaagcagtataatt
cctctgatggagagattctatgacccaacattaggtgaagttcttttagatggcgaaaac
ataaaaaatttgaaagtagaatggttaagaagccaaattggtctggtgacacaagtacca
gctttattgagtttaagcattcgggaaaatattgcttatggaagatctgctacctttgat
cagatagaagaggcagcaaagacagcccatgcccatgggttcatcagttcacttgaaaag
gggtatgaaacccaggttggtcgagctggtatagcactcactgatgaacaaaagatcaaa
atttcaattgcccgtgctgtgctttcgaatccatccattctgttgcttgatgaggtcacg
ggaggacttgattttgaagctgaaaaggctgtccaagaagcattagatgttctcatgttg
ggaagatcaaccattataattgctagacgtcttagcctcattaaaaatgctgattacata
gctgtaatggaggagggtcatcttgttgaaatgggtacacatgatgaactagtgaactta
gatggcctttatgccgagcttttaaggtgtgaggaagcaacaaaacttcccaaaaggatg
cctaccaagaatagcagggagcgtaagtcactccaaattgaggacgcatcagtgagccaa
tactttcaagaatcctcctctcctaagatgacaaaatcaccttcacttcaaagaacacat
ggcatgcttcagttttggcgatcagataccaacagaaattctcatgattcaccaaaggac
cgaagtccaccttcagaacaaactgtggacaatgggatccctatggttgcaattgaagct
gaaagagtgccatccatcaagagacaggatagttttgaaatgaaactgcctgatcttcct
aaagttgatgtccaccctatacaacggcagtcatctaagaattcagaacctgactcgccc
atatctcctcttttgacttctgatcctaagaatgagcgttcacattcgcaaacttttagc
agaccacagagtgaacgagatgatgcgagttctgaacacagtgaactggatgaggttcag
caccagaaacctccatccttttggcgtcttgcatcacttagtattgctgaatggccttat
gcacttttgggtacaattggtgctgctatatttggctcgattaatcctctgcttgcttac
acaatagcacttattgtgtcagcatactatcatatagacaccaatgatatgcgccacgaa
gtgaacaggtggtgtttattcatagtcggcatgggtgttattacagtgcttgtcaactgg
ttgcaacatttctattttggaataatgggggagaagatgactgagcgcataagaaggatg
atgttctctgcaatgctgcgcaatgaagttggatggtttgacaaagaggagaacaatgct
gatacactgtccatgcgcctggcaaatgatgctacatttgtccgtgctgccttcagtaac
cgactttccatctttatacaagacactgctgcagtatctgtggctcttcttattggaatg
ttgttgggatggcgggtggcacttgttgcgcttgcaactttaccagttcttgttatctct
gctattgcacagaaattgtggcttgctggcttctcaagaggaatccaagagatgcataga
aaggcttcgttagtacttgaagatgcagtacggaacatatacactgtagtagcattctgt
gctgggaacaagataatggaactctacatattacatcttggcaagatactgaagcaaagt
cttgtgcaaggattggctataggcttcggctttggtctctcgcagtttcttctttttgcc
tgcaacgctctacttctttggtacactgctatttcagttgaccagcaacgtctgacaata
gccacaggactgaaagagtatattctcttttcatttgcatcatttgcattggtggagcct
tttggacttgcaccttacatacttaaaaggaggaaatctcttatgtcagtgtttgaaatt
atcgaccgtgagccaaagattgatcctgatgataccactggcttgaaaccacccaatgtc
tatggaagtattgaattcaagaatgttgatttctcttatcctgctcgccctgaaattctt
gtgctgagcaattttaatcttaaagttagtggtgggcaaacagttgcagtagtaggggtt
tctggatcagggaaaagcactattatttctttgatcgagagattctatgacccggtttct
ggccaagttctactggatggtcgagatctgaagtcatttaacctgagatggttgcgaagc
cacatgggcctgattcagcaagagccagttattttctcgacgacaataagagaaaacatt
atttatgcaaggcacaatgcaacagaggctgagatgaaggaagctgcaaggatagcaaat
gctcatcatttcattagcagcttgccacacggctatgacactcatgtggggatgagaggg
gttgatctaacacctggtcaaaagcaacggattgccattgctagggtggttttgaagaat
gcaccgatattgttgttggatgaggccagctctgctatcgagtctgaatcaagtagagtg
gtacaggaagctctcgacactctggtcatgggtaacaagacaacgattctcattgcgcac
agggcagcaatgatgaagcatgtggacaacattgttgtcctaaatggtggtaggatagtt
gagcagggtacacatgactctctgatggaccagaatggtctatatgttagattgatgcaa
ccccattttggcaagggccttcgccagcatcggctaatgtaa
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