Panicum hallii (Hall's panicgrass): 112876046
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Entry
112876046 CDS
T07366
Name
(RefSeq) ubiquitin-activating enzyme E1 3-like isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112876046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112876046
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112876046
Enzymes [BR:
phai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
112876046
Ubiquitin system [BR:
phai04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
112876046
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112876046
Exosomal proteins of other body fluids (saliva and urine)
112876046
Exosomal proteins of colorectal cancer cells
112876046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_UFD
E1_4HB
Motif
Other DBs
NCBI-GeneID:
112876046
NCBI-ProteinID:
XP_025795865
LinkDB
All DBs
Position
9:64579472..64585526
Genome browser
AA seq
1063 aa
AA seq
DB search
MLPTKRAEGAEDSSDGVVKKGRIGESVVGAEAMVAGEEVGGGGSGSGNGSGVAEIDEDLH
SRQLAVYGRETMRRLFASNVLISGLNGLGAEIAKNLALAGVKSVTLHDAGNVELWDLSGN
FFLSEDDIGNNRAVACVAKLQELNNAVDISALTEELATKHLSKFQAVVFTDISMDKAFEF
DDYCRSHQPPICFIKTEVRGLFGSVFCDFGPEFTVHDIDGEDPHTGIIASITNDNPAMVY
SVDDERLDFQDGDLVVFSEVQGMTELNDGKPRRIIRSRPYSFCIEEDTSKFGIYAKGGIV
TQVKEQSILQFKSLRDSIREPGNFPLSDCLKFDRPPLLHFAFLALDKFRKEFGRFPAVGC
GQDAQRIVEFTASFNEATIDYKIEGKLDEKLLRLFASGSRAVLNPMAAIFGGIVGQEVVK
ACSGKFHPLYQFLYFDSLESLPTHQLDPKDLKPLNSRYDAQISVFGSKLQKKLRDANVFV
VGSGALGCEFLKNLALMGVSCSRKGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAA
TAASAINSCFHIDALQNRACPETEHVFHDAFWEGLDVVINALDNVNARMYMDMRCLYFQK
PLLESGTLGTKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFE
GLLDKTPNEVNSFLSNPTQYAATMKKAGDAQARELLERIRECLEEERCERFDDCITWARL
KFEDYFSNRVKQLTFTFPEDAATSTGAPFWSAPKRFPRPLEFSATDVSHVQFIMAASILR
AVCFGIDIPDWAKSTSNLIDAISKVYVPEFKPKSGVKIQTDEKANNISSASVDDAVVIED
LLTKLEACTKKLPPGFRMKPIHFEKDDDTNFHMDLIAGLANMRARTYGIQEVDKLKAKFI
AGRIIPAIATSTAMATGLVCLELYKVLAGGHPVEDYHNTFANLAIPMLTISEPLPPTVIK
HQGMRWTVWDRWSIKGDITVAELLKWLSDKGLSAYSVSYGTSLLYNTMFPRHKDRLGRKI
ADVAKEVAKVDVPEYRKHLDVVVACEDNKGNDIDIPLISIYFR
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgacgaagagagcggagggagctgaggacagtagcgacggggtcgtgaagaag
ggtcggattggggaatcggttgtgggggcggaggcgatggtggcgggggaggaggtgggc
ggcggcggtagcgggagcggcaatgggagcggggtggcggagattgacgaggacctgcac
agcaggcagcttgccgtgtacggaagggagacaatgcggcggctgttcgcgtccaacgtg
ctcatctccggcctgaacgggcttggggctgagatcgcaaagaatcttgctctggctggt
gttaagtctgtcaccctacatgatgcgggaaatgtggaattgtgggacctatcaggcaat
ttctttctatctgaggatgacattgggaataacagggctgttgcttgtgttgcaaagctt
caagaacttaacaatgctgtcgatatatctgctttaacagaagaattggccaccaagcac
ctttcaaagttccaggctgttgttttcactgacattagtatggacaaggcatttgaattc
gatgattattgtcgcagccaccagcctccaatttgctttatcaaaacagaagtccgtggt
ctttttggcagtgtcttttgtgactttgggcctgagttcactgttcatgatatcgatggt
gaagatccgcatactggcataattgcatccatcaccaatgacaatcctgcaatggtgtac
tctgttgatgatgagcgccttgatttccaggatggtgatcttgttgttttctcagaggtc
cagggaatgacagaactgaatgatggcaagccaaggaggataatacgttcaagaccatat
tcattttgcattgaggaggatacaagtaagtttggcatttatgcaaaaggtggaattgtt
acgcaggtgaaagaacaaagtatcttacaatttaagagtttgagagattctattagagaa
cctggcaatttccctctgagtgattgcttgaagtttgaccgcccacctctgcttcatttt
gcatttctagctttggataaatttaggaaagagtttggacgtttccctgctgttggttgt
ggccaggatgcccaaaggattgtggaattcactgcttctttcaatgaagccacaattgat
tacaagatagaaggtaagcttgacgagaagctgctgcggctttttgcaagtggttctaga
gctgtcctgaacccaatggctgctatttttggtggaattgttggtcaagaagttgtgaag
gcatgttctggaaaatttcatccactgtaccagttcttgtacttcgattctcttgaatct
ctgccaacccatcaattggaccctaaagacttgaagccattgaatagccgctatgatgct
cagatttctgtttttggctctaagcttcagaaaaagctgcgggatgccaatgtctttgtt
gtgggatctggtgctcttggatgtgaattcttgaagaacctagctttaatgggagtatct
tgcagccgtaaagggaaactaactataacagatgatgatgtcattgagaaaagtaacttg
agccgccaatttctgtttcgtgattggaatattggacaggctaaatctacagttgcagct
acagctgctagtgctatcaattcctgctttcacattgatgctctccagaatcgcgcctgt
ccagagactgagcatgtgttccatgatgcattctgggagggccttgatgttgtcattaat
gcacttgataatgttaatgctaggatgtacatggacatgagatgcttgtacttccagaaa
ccactcttggaatctggaacgttgggtacaaaatgtaatacacaaatggtaattcctcac
cttactgaaaattatggtgcttcacgagaccctcctgagaagcaggcacccatgtgcaca
gtccattcatttccgcacaatattgaccattgtctgacatgggctcgctcagagtttgag
ggcctgctagataaaactccaaatgaagtcaactcttttctgtctaatcctactcaatat
gctgccaccatgaaaaaggcaggtgatgctcaggccagggaattgcttgagcgtatacgt
gaatgcctcgaggaggagcgctgtgaaagatttgatgattgcataacctgggcaagactg
aaatttgaagattacttctctaatcgtgtgaagcagctaacattcacatttcctgaagat
gccgccactagcacgggagcccctttctggtctgctccaaagcgtttccctcgcccgctg
gaattttcagctactgatgtatcacacgttcagtttataatggctgcttccatattgaga
gcagtgtgttttggaatcgacatacctgactgggcaaagagcactagtaatctgattgat
gcaatcagtaaagtttacgtacctgaatttaagccaaagagtggggttaagattcagaca
gatgagaaggccaataacatctccagtgcctcagttgatgatgctgttgttatcgaagat
cttttaacaaagttggaagcatgtaccaagaaactacctccaggattccgaatgaaacct
attcattttgagaaggatgatgatacaaatttccacatggacttaattgctggccttgca
aatatgcgcgcaaggacctacggcatccaagaggtcgacaagctgaaggcgaaatttatt
gcaggaagaatcatcccggctattgcaacttcaacagccatggccacaggacttgtgtgc
cttgagctttacaaggttctggccggtgggcacccagtcgaagactaccacaacacattt
gctaacctggcaataccgatgctcaccatatctgaacctcttccacctactgtgatcaag
catcaaggtatgaggtggacggtatgggatcgatggtctatcaagggtgacatcacagtt
gcagagctcctgaagtggcttagtgacaaaggcttgagtgcttacagtgtctcctacggc
acatcgctgctgtacaacacaatgttcccaaggcacaaggatcgactgggcaggaagatt
gcggatgtggccaaggaggtggcaaaggtcgacgtcccagaatacaggaagcatctggat
gtcgtcgttgcttgtgaggataacaaagggaacgacatcgacattcctcttatctccatt
tacttccggtag
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