Panicum hallii (Hall's panicgrass): 112876064
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Entry
112876064 CDS
T07366
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112876064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112876064
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112876064
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Clathrin
Motif
Other DBs
NCBI-GeneID:
112876064
NCBI-ProteinID:
XP_025795887
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All DBs
Position
9:62216563..62224344
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AA seq
872 aa
AA seq
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MAGVGGSGGGGGGDTEMGGWTGLLHSSTKLLEQAAPTPHFPPLQRNLDQLEVLSTKLKAK
TIRAEAPSQSLSATRLLAREGINAEQLARDLKSFELKTTFEDVFPSEATSVEEYLQQLHE
VAIVSSIQEAQKDNLRSFNNYMMQVLEDDWQKEKRDFLQSLSLFSTLPKRSTNISTSGLA
RPALMPPSTSSPQASSGLPSVGIMPIPNKTIIENKSSVYAGVVRDLNDARGRSLPFNPAM
AFRAVYESLSVDAVGTKSVTMQKMWHLIQALVGEGSTHRNVSRKMSLVIGARRHLEWGHE
KYILETINSHPALAALGGSVGNLQKIRAFMRVRLRDQGVLDFDATDLRRQPPVDTTWQQI
YFCLRTGYYDEARQVALSSRAAHNFAPLLADWISTNGAVSQETALAASEECDKMLRMGDR
PGRPGYDRKKLLLYAIICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREYNNASSSNV
LNEGLVPYTLDDLQSYLNKFEPSYYTKNGKDPLIYPYVLFLSIQLLPAILYLSKEVGEEG
YHVDAVHISIALADHGVLPDGVGSSQKIGVMDACAEAASIIRQYGSMYLCNGNIGLALQY
YAQAAAAMGGGEVSWIGQGNADQQRQRSLMLKQLLTEILLRDGGIQLLLGPSGMGEEGEL
KKYMMDWRSRQQFLLEAAHRCQEAGLYDKAVEIHKRVGSFAMALQIINKCLSDAVCAMAH
NRLDGESQATALIHSGNEILETARYSSEASVQDKDLISEQQTVLRQLEAILHIYRLARAG
QTVDALRETIRLPFLHLDPQSPNVIVDIFRNLSPYVQACIPDLLKVALNCIDNVRDTDGT
LRAVKSKIANLVANNMSRNWPQDLYQKVAQCI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtcggcggtagtggcggcggaggcgggggtgacacggagatgggcggatgg
acggggctcctccactcctccaccaagctcctcgagcaggccgcgcccaccccgcacttc
cctccccttcagaggaacttggaccagctcgaggtgctctccaccaagctcaaggccaag
accatccgagccgaggcgccgtctcagtcgctttccgctaccaggttgctggctcgcgag
gggatcaatgcagagcagctcgccagggacctcaagtcattcgaactcaagacaaccttt
gaggatgttttcccatctgaagcaacctctgtcgaggaatacctgcagcagcttcatgaa
gttgctatagtttcatccatccaagaagctcaaaaggacaacttaaggagttttaacaac
tacatgatgcaagttcttgaggatgactggcagaaagagaagagagacttcttgcagagt
ctaagcctgttttctacattacccaagagaagcactaatatctcaaccagtggattggct
cgccctgctttgatgccaccatcaacttcgagccctcaggcttcatcaggcctgccctct
gtagggatcatgcctatacctaacaagactattattgaaaataaatcttcagtttatgct
ggggttgtaagggacctcaatgatgctagaggacgcagtctaccttttaatcctgctatg
gctttcagggctgtttatgagtcattatctgttgatgctgttggcacaaaatcagtgacg
atgcagaaaatgtggcatctaattcaggcgttagttggggaagggtcaactcaccgaaat
gtttcaagaaaaatgtcactagtgataggtgcaagacgccatctcgagtggggtcatgaa
aagtacatacttgagaccatcaacagccatccagctctggctgctcttggtggatctgtt
ggcaatcttcagaagattcgggcattcatgcgggtacggctgcgggatcaaggtgtgcta
gatttcgacgcaactgacctacgcagacagcctccagtggatacaacctggcagcagatt
tatttctgcttgagaaccggatattatgatgaagcaagacaagttgccctatcatctcgt
gctgcccataactttgccccactgcttgcagactggatttctactaatggtgctgtatcg
caagagactgctctggctgcttctgaggaatgtgataaaatgctaagaatgggtgatcga
ccaggacgccctggttatgatagaaagaagttgctgctgtatgccataatttgtggttgt
cgacggcaaattgacaggctgctaaaagatctgccaacactttttaacactatagaggat
ttcttgtggtttaagttgtcagctctgcgggaatataacaatgcatcttcttctaatgtt
ttgaatgaaggcttggtgccttatacactggatgatctgcaaagttacttgaacaaattt
gagccatcatattatacgaagaatggaaaagatccgttaatctatccctatgttctgttc
ttaagcatccaattacttccagcaattctttatctgtccaaagaagttggagaggaggga
taccatgttgatgctgtgcatatttcaattgctttagctgaccatggtgttctccctgat
ggtgttggatcaagccagaagataggtgtcatggatgcttgtgcagaggctgccagcata
atacggcagtatggctctatgtacttgtgtaatggcaatattggtttagccttacagtat
tatgcgcaagccgccgctgcgatgggtggaggagaggtatcatggattggtcaagggaat
gctgatcagcagcgacaacgaagtttgatgttgaagcaactcctgacggagatattacta
agggatggtggtatacaacttctgctaggtccaagtggaatgggggaagaaggggaacta
aaaaagtatatgatggattggagaagcaggcagcaatttttacttgaagcagcccatcgt
tgtcaagaggcagggctctatgacaaagcagtggaaattcataaaagggtaggatctttt
gccatggcacttcagataataaacaagtgcctgtctgatgctgtctgtgccatggcacac
aataggttagatggtgagagtcaggctacagccctaatccattctggcaatgagattttg
gagacagccagatattcttccgaagccagcgttcaagacaaggatctcatttctgagcaa
caaactgtactgagacagcttgaagccattctccatatttataggctagctcgagctgga
cagactgtagatgctttgagggaaaccatcaggctccccttccttcatttggatcctcag
tctccaaatgtgattgttgatattttcaggaatttatcaccctatgttcaagcttgcata
ccagatctcctgaaggttgctctgaattgcatcgacaatgttagggacactgatgggacc
ttgcgtgctgtcaagtccaagattgcaaacctagtcgcaaacaacatgagccggaattgg
ccacaggatttgtatcagaaggtggcgcagtgcatataa
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