KEGG   Panicum hallii (Hall's panicgrass): 112876144
Entry
112876144         CDS       T07366                                 
Name
(RefSeq) SKP1-like protein 13
  KO
K03094  S-phase kinase-associated protein 1
Organism
phai  Panicum hallii (Hall's panicgrass)
Pathway
phai03083  Polycomb repressive complex
phai04120  Ubiquitin mediated proteolysis
phai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112876144
   04120 Ubiquitin mediated proteolysis
    112876144
  09126 Chromosome
   03083 Polycomb repressive complex
    112876144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phai04131]
    112876144
   04121 Ubiquitin system [BR:phai04121]
    112876144
   03036 Chromosome and associated proteins [BR:phai03036]
    112876144
Membrane trafficking [BR:phai04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    112876144
Ubiquitin system [BR:phai04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     112876144
   Cul7 complex
     112876144
Chromosome and associated proteins [BR:phai03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     112876144
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     112876144
SSDB
Motif
Pfam: Skp1 Skp1_POZ FbpC-like_RD
Other DBs
NCBI-GeneID: 112876144
NCBI-ProteinID: XP_025795978
LinkDB
Position
9:complement(16233666..16234864)
AA seq 228 aa
MAPPAAAADKREGKRPMPPEGDPAAAAAAGETTEQEAQAAGGAEAGDDLVLVADCGAEVR
LTRSAARMSTTILHMMDDCAEGRVPVAGVHAGVLRLVAAYCERHAPHYDPEASAARLRDP
FPPFSIDFRPTAHAIRPVTDPGPDPHGLEAWDEKFIADLPDNSALFAVILAANYLGIEDL
LDLGCTAVADKMRGKAPEEVRVALDIENDYTPEQEAEVRRENAWAFED
NT seq 687 nt   +upstreamnt  +downstreamnt
atggctcccccggccgccgccgccgacaagcgcgagggcaagcgccccatgcccccggaa
ggggaccccgccgccgccgccgccgccggggagacgacggagcaggaggcgcaggcggcg
ggaggcgccgaggccggcgacgacctcgtcctggtggcggactgcggcgcggaggtgcgc
ctcacgcgctccgcggcgcggatgtcgacgacgatcctccacatgatggacgactgcgcg
gagggccgcgtccccgtcgcgggcgtccacgccggcgtcctccgcctggtggcggcgtac
tgcgagcggcacgcgccgcactacgacccggaggcctccgcggcgaggctccgcgacccg
ttcccgccgttctccatcgacttcaggcccaccgcccacgccatcaggcccgtcaccgac
cccggacccgacccgcacggcctcgaggcgtgggacgagaagttcatcgccgacctcccc
gacaactccgccctcttcgccgtcatcctcgctgccaactacctgggcatcgaggacctg
ctcgacctgggctgcacggccgtggccgacaagatgaggggcaaggcgcccgaggaggtc
cgcgtcgcgttggacatcgagaatgactacacgcccgagcaggaggccgaggtcaggagg
gagaacgcctgggcattcgaggattga

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