Panicum hallii (Hall's panicgrass): 112876260
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Entry
112876260 CDS
T07366
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112876260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112876260
03110 Chaperones and folding catalysts [BR:
phai03110
]
112876260
03029 Mitochondrial biogenesis [BR:
phai03029
]
112876260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112876260
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112876260
Messenger RNA biogenesis [BR:
phai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112876260
Chaperones and folding catalysts [BR:
phai03110
]
Heat shock proteins
HSP60 / Chaperonin
112876260
Mitochondrial biogenesis [BR:
phai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112876260
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112876260
Exosomal proteins of other body fluids (saliva and urine)
112876260
Exosomal proteins of breast cancer cells
112876260
Exosomal proteins of colorectal cancer cells
112876260
Exosomal proteins of bladder cancer cells
112876260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
CO_dh
Motif
Other DBs
NCBI-GeneID:
112876260
NCBI-ProteinID:
XP_025796115
LinkDB
All DBs
Position
9:complement(13040940..13046342)
Genome browser
AA seq
577 aa
AA seq
DB search
MYRAAASLASKARQAGSSAAARQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAV
KVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGD
GTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQV
GTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITN
SKTQKCELEDPLILIHDKKVSNMHAVVKVLEMALKKQRPLLIVAEDVESEALGTLIINKL
RAGIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLENVESHMLGTCKKVTVSK
DDTVILDGAGDKKSIEERAEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA
EVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNAL
KTPVHTIASNAGVEGAVVVGKLLEQGNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVD
AASVSSLMTTTESIIVEIPKEETTPAPAMGGMGGMDY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgcggcagccagcctcgcctccaaggcgcggcaagccgggagcagcgccgcc
gctcgccaggttgggagcaggcttgcctggagcagaaactatgctgccaaggatatcaag
tttggcgttgaggcccgtgctctgatgctgaggggtgttgaggaattggctgatgcagtc
aaagtgacgatgggtcctaagggtcgcaatgtggttattgaacaaagctttggtgcacct
aaagtcacaaaggatggtgtgactgttgctaagagcattgaattcaaggatagagtaaag
aatgttggtgctagccttgtgaagcaggttgccaatgcaactaatgacactgctggagat
ggtaccacatgtgcaactgttttgacaaaagcaatatttactgaggggtgcaaatctgtt
gcggctggaatgaatgctatggatttgaggcgcggaatctcaatggctgttgatgctgtt
gtgaccaatctgaagggcatggccaggatgatcagcacgtcagaagagattgcacaggtg
ggtacgatatcagcaaacggggaaagggaaattggtgagcttattgccaaggctatggag
aaggttggcaaagagggtgtaatcaccattgcggatggtaacactctttacaatgagctt
gaagttgttgagggcatgaaacttgacagaggttacatctctccatacttcattaccaac
tcaaaaacccaaaaatgtgaactggaagacccattgattttgattcatgacaagaaggtt
tcgaacatgcatgcagtggttaaagttttagagatggcccttaagaagcaaaggcctcta
ctgattgttgcagaagatgtggaaagcgaagcattgggcactctgattattaacaagctt
cgtgctggcatcaaggtctgtgctgtcaaagctcctggttttggggaaaataggaaggca
aacttacaagaccttgctatccttaccggaggagaggtcataactgaagaactgggaatg
aaccttgagaatgttgagtctcacatgttgggtacatgcaaaaaggtgacggtctctaag
gatgacactgttattcttgacggagctggagacaagaagtccattgaggagagggcagag
cagattagatctgcaattgagaatagcacgtctgattatgacaaggaaaagctacaagag
cggttggcaaagctctctggaggtgttgctgttctaaagattggaggagccagcgaagca
gaagttggtgagaagaaggatagagtgacagatgcgttgaatgctactaaagcagctgtg
gaagagggcatcgtgccaggtggtggtgttgctcttctctatgcatcaaaggagcttgat
aaattgcagactgcgaactttgatcagaagattggtgttcagattattcagaatgctctg
aagacccctgtgcacactattgcttccaatgctggcgtggagggagcagtggtcgtgggc
aagcttttggagcaaggaaaccctgaccttggttatgatgctgctaaaggtgaatacgtc
gacatggtgaaggccggtatcatcgacccactaaaagtgatcagaactgccctggtggat
gctgctagcgtgtcgtccctgatgaccaccacggagtccatcatcgtagagatccccaag
gaggagacaacaccggcaccagcaatgggcggcatgggtggaatggactactaa
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