Panicum hallii (Hall's panicgrass): 112876275
Help
Entry
112876275 CDS
T07366
Name
(RefSeq) probable alpha-mannosidase At5g66150
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112876275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112876275
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
112876275
Membrane trafficking [BR:
phai04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
112876275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
112876275
NCBI-ProteinID:
XP_025796134
LinkDB
All DBs
Position
9:47925630..47945609
Genome browser
AA seq
971 aa
AA seq
DB search
MATALPLLLAVIAAAATAMGASAARAFSVASNSSAGAETTVAGGKLHVHLVPHSHDDVGW
LKTVDQYYLGSNNSIQRACVINTLDSVVDALAKDPARKFVVVEQAFFQRWWAEKSSNIQA
IVRKLIDSGQLEFINGGWCMHDEAAVHYIDMIDQTTLGHRMIKKQFNKTPRAGWQIDPFG
HSAVQAYLLGAELGFDSVHFARIDYQDREKRKADKALEVIWRGSRTFGSSSQIFANVFPV
NYSPPDGFGFEILDESIMPVQDDLMLSDYNVEERVNDFVAAAIAQANVTRTNDIMWTMGE
DFSHQYAESWFRNMDKLIYHVNKDGRVHALYSTPSIYTDAKYASNKSWPVKYDDYFPYAD
AKNTYWTGYYTSRPTFKRYVRVHSGYYLAARQIEFLVGRSSLGLFTTSLEDAIGISQHHD
AVSGTAKQHTTDDYSRRLALGASKVEKGVNIALTCLTSSNGTCLSSVVKFSQCPLLNISY
CPSTEERISAVKSLVVVAYNPLGWERSDFIRVPVNDENLVVKSSDGTIVESQLVEVDNVT
RNLRKFYLKAYLEITADNPPKYWLVFQALVPPMGWNSYYISRSPGYNNNGYVSTMVSPSI
DTVEVGPGPLKMLFSSASGQLKRIFNSVSGVDLPLQQSFLWYISNEGDTVDSQASGAYIF
RPNGTTPTIVSSSVPLKVIRGPLVDEVHQQFSSWIYQVARLYKNKEHAEVEYTVRNHRED
WNLEMTEPVAGNYYPVNLGAYVADGKYEVSVLVDRAVGASSIRDGELEIMLHRRTVRDDG
KGVEEPLGEVVCLDGSCKGLTARGTYYVKVDKLGHGPHWRRTYGQQVYSPYLLAFSHEDE
TNWKSYNVARASMMDANYSLPDNVAIITLQNLDDGTTLLRLAHLFQAAEDPRFSVIAKVE
LRKVFGKRNIKELTETNLSANQKKSDMKKLNWKVVGDTDSGLTPLKGGPVDSQALVVELG
PMEIRTFLLKF
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcacttccgctgctgctcgcggtgatcgcggcggccgcgacagcaatgggg
gcatcggcagcgagggcgttctccgtggcgtccaactcgagcgcgggggcggaaacgacg
gtggcgggcggcaagctgcacgtgcacctggtgccgcactcgcacgacgacgtcggctgg
ctcaagaccgtggaccagtactacctcggatccaacaacagcatccagagggcgtgcgtg
ataaacacgctcgactccgtggtggacgcactcgccaaggaccccgcccgcaagttcgtc
gtcgtagagcaggctttcttccaaaggtggtgggcagagaaaagctcaaacatccaagcg
atagtccgcaagttgattgattcaggccagctagagttcataaatggtggatggtgcatg
catgatgaagctgcagtccattatattgacatgattgatcaaaccacgcttggtcaccgc
atgatcaagaaacaattcaataagactccaagggctggctggcaaattgatccttttgga
cattctgcggttcaagcttacttgcttggagcagagcttggctttgattctgtgcatttt
gcaagaattgattaccaagacagggaaaagcgtaaagcagataaggccttagaggtcata
tggcgtggctcaagaactttcggctcatcttcacagatatttgcaaatgtatttcctgtc
aattatagtcctccagatggctttggcttcgaaattttggatgaaagtatcatgcctgtc
caggatgacttgatgctgtctgattacaatgtcgaagaacgagttaatgattttgttgct
gcagccatagcacaggcaaatgttactcgtacaaacgacataatgtggaccatgggggaa
gatttcagtcatcaatatgcagaatcttggttccggaatatggacaaacttatctatcat
gtgaacaaggatggccgagtgcacgcattatattctactccatccatctacacagatgca
aaatatgcatcaaacaaatcttggccagtaaaatatgatgattatttcccctatgctgat
gcaaaaaatacatactggactgggtattatacaagccgtccaactttcaaacgatatgtt
cgagtgcacagtggatattacctggctgcacgtcagatagaatttttagtgggtaggagt
tccttaggattgttcactaccagcttggaagacgcgataggaatttcccagcatcatgat
gctgtctcaggtacagcaaaacaacacacgacggatgactactcaaggcgccttgctctc
ggagcatctaaggtcgagaaaggtgtgaacattgctctgacctgtctaacaagttccaat
ggaacatgtctgtcctcagtagtaaaatttagtcagtgccctcttctcaatataagctac
tgcccttcaactgaggaaagaatttcagcagtaaagagtttagttgtagttgcctacaac
cctcttggatgggaacgtagtgacttcataagggtcccggtgaatgatgaaaaccttgtt
gtaaaaagctctgatggaactattgttgagtcgcaactagttgaggttgataacgtgaca
agaaacttaaggaaattttatttgaaggcttatcttgaaatcacagcagacaacccacca
aagtattggctagtatttcaagcgcttgtgccaccaatggggtggaattcttattacatt
tcaagatccccaggatacaacaataatgggtatgtctcaaccatggtttctccaagtatt
gatacggttgaagttggacccgggcctctaaagatgttgttttcatcagcatcaggacaa
ctcaagaggatatttaattctgtatctggagtggatttaccacttcaacaaagctttctt
tggtatatatcaaacgaaggtgataccgtggattcacaggcatctggagcatatatattt
agaccaaatggtactacaccaaccattgtttcatcatcggtgccgctgaaagttatccgt
ggacctctggttgatgaagtgcatcaacaattcagctcatggatttatcaggttgcacga
ctctacaagaacaaggagcacgctgaagttgaatacacggtgagaaaccacagggaagat
tggaaccttgaaatgactgaaccggttgcaggaaattactatccggtcaatctaggagcg
tatgtagcagatggaaaatatgaggtgtctgtacttgtggaccgtgctgttggagcatca
agtattcgcgatggtgagctagagattatgctacacaggcgaacagtaagagatgatggc
aaaggtgtggaggagccactaggtgaagttgtttgtctggatggaagctgcaaggggctc
acggccaggggaacatactatgtcaaagttgacaagctaggtcatggacctcactggcga
agaacatatggccagcaagtatattcaccctatcttctggctttttctcatgaggatgag
acaaattggaaatcctataatgttgccagagcaagcatgatggatgcgaattacagtctt
cctgataatgttgcaattataaccttgcagaatctagatgatggtacgacattacttcgc
ttggcccatctttttcaggcagcagaggaccctcgattttcagttatagcaaaagttgaa
ctaagaaaggtgttcggaaagagaaatatcaaggagttgaccgagactaacctttctgca
aatcaaaagaagtcagacatgaagaagctcaactggaaggtagttggggacacggatagt
ggtctcaccccattgaagggtggcccagttgacagtcaagctcttgtagttgagttggga
cccatggaaatacgcactttcttgctgaagttctga
DBGET
integrated database retrieval system
