Panicum hallii (Hall's panicgrass): 112876279
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Entry
112876279 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112876279
KO
K11593
eukaryotic translation initiation factor 2C
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112876279
03036 Chromosome and associated proteins [BR:
phai03036
]
112876279
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112876279
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112876279
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112876279
microRNA pathway
RISC loading complex
112876279
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Gene cluster
GFIT
Motif
Pfam:
ArgoL1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
112876279
NCBI-ProteinID:
XP_025796139
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Position
9:3000450..3003723
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AA seq
572 aa
AA seq
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MYHLHQFLRGRQRDMPQETRQVLDVVLRESPSWNYVTVSRSFFSTTFGHRGDIGEGLECW
RGYYQSLRPTQMGLSLNIDISATSVFKPVTVIKFVEEFLSIRDTSRPLSDRDRVKIKKAL
RRVCIETNHQQDQIRRCKITGVTPMPMSQLMFGVSTKVEEHIHRNIATFLVKVEGTSISV
RQNLSTTTIKMLVEHACDKRGIRNYDGYPVFLGKVLDDTKLLSDCKVCNNCIVEVRGRGR
AGRERRIKCTTFDDEMKDIDLFSVVSPLSKTLTNTKTQEKSATFLSGQAKWYGRQVFISL
CRMHFRKKSLDGKFNASHILFHDGRVVFDESCMEVDFTGHSCKNDYGVIAEIFKKWFCIP
DEAEEEGRYPLFVADLIDYLLDCPLGEKSNSAAAIAFLVNHPALTTFMDRIGQCTTLDSM
VDRLTEFQKFEFDEAVGSYNDWSERVEDVPAMYDTLVYDPFRRVDAPEETLYTENLRSCL
KFARNHFRHARPDLSLERVEASFSLNLVDFLPMILQAIVKSFEGPPAFDMVTLLGDHVAD
RKCKRDVDAENPAKVIASPSKKPKISFSLKGK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaccttcaccagtttctgcgtggaagacagagggacatgcctcaggagaccaga
caagtacttgatgttgtcctcagggagtctccgtcttggaattatgttacagtatccaga
tcctttttctctactacttttggtcacagaggagacatcggcgaggggcttgagtgttgg
agaggttactaccagagcctacgcccaacacaaatggggctttcactgaatatagatata
tctgcaacatcagtttttaagcctgtgacagtgatcaaatttgtggaggagttcctcagc
atacgtgatacctctcggcctttgtcagacagagatcgtgtgaagataaagaaagcacta
cgcagagtttgcattgaaacaaatcatcaacaggaccagatcagaagatgcaaaataact
ggggttactcccatgcctatgagccagctgatgtttggcgtgtcaactaaagtagaagaa
catattcacaggaacattgccacttttttggttaaagttgagggtacatccatctctgtc
cgacaaaacttgagcaccacaacaattaaaatgttggtagaacatgcatgtgacaagaga
ggcatcaggaattacgacggttaccctgtttttcttggaaaggtcttagatgatactaag
cttctctctgactgcaaagtctgcaacaattgcatagtcgaagtcaggggcaggggcagg
gctggccgggaaagacgaatcaagtgcacaacttttgatgatgaaatgaaagatattgat
ctgttcagtgtggtttcccctctttctaagactttaacaaacactaaaacccaagaaaag
agtgcaacattcttatctgggcaagctaaatggtatggtcgccaagtgtttatctccttg
tgcaggatgcacttcagaaaaaagagcttggatggaaaatttaatgcaagtcacatcctc
tttcatgatggacgggttgtgtttgatgagagttgcatggaggtggattttactggacat
tcctgcaaaaatgactacggtgtgatcgcagaaatatttaaaaaatggttttgtatccct
gatgaagcagaggaagaaggtcgataccctctcttcgttgctgacttgattgattattta
ttggattgtccactgggtgagaaatcaaatagcgctgctgctattgcattcctagttaac
catcctgcattgactacttttatggatcggattgggcaatgcaccacgctggatagcatg
gtagacaggcttactgaatttcagaagtttgaatttgatgaagcagttggaagctataat
gattggagtgaaagagttgaagatgttcctgcaatgtatgatactctagtgtatgatcct
tttaggagggttgatgcaccagaagagactctttatactgagaacctaaggagttgcttg
aaatttgctagaaaccacttcaggcatgcaagacctgatctttcgttggagagagttgaa
gcctcattttctttgaatttggtggactttctacctatgatactacaagcaattgtcaag
agttttgaaggaccccctgcatttgacatggtgacattgcttggcgatcatgttgcagac
agaaagtgcaagagagatgtagacgcggagaatcctgcaaaagtgattgcgtctccttct
aagaagccgaaaataagcttttcgttaaagggaaaatga
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