Panicum hallii (Hall's panicgrass): 112876552
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Entry
112876552 CDS
T07366
Name
(RefSeq) nuclear pore complex protein NUP1-like
Organism
phai
Panicum hallii (Hall's panicgrass)
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_7
EF-hand_1
PK_Tyr_Ser-Thr
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_9
EF-hand_4
AIF-1
Kdo
Kinase-like
Motif
Other DBs
NCBI-GeneID:
112876552
NCBI-ProteinID:
XP_025796468
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All DBs
Position
9:complement(3360084..3373398)
Genome browser
AA seq
2021 aa
AA seq
DB search
MYPSPYAGSGAGAGGKIRRRPPTRAASTPYERPPAAAAAHRLAAAAAAASASSGPGGEGG
SGGWVSRLVDPASRLIAGGAARLFGSVFRKRLAPPPAPSPQLSSPHGRNNDPTQDFPDST
NVDSPPLPEGGMDKGKNIAATSDDKALSEVEHLLMRKTFTRVEFDRLTDLLRARTIEPDP
PTSIVSREEKNEGIRIDGIGGSTSHQMAAESPTVKVHSHGARSPAELAKQYMSSRYSRGP
PSSSLRSRLFLENKGEASNNAYDRRPEPPIVQAPIEFGNENPGLPVNGYGTSGLRGRSAI
YRMSRSPYFKGSSSSDVNTFSLSQRAQSSHIGGRQVLKRRGGDLENEVGSIGPIRRIRQK
SNMMSPFRDARAISRGNLLTSRTSGSDFTEDSTSIQESPSSKRLLLGTTSARPLESHKNG
DSKPSDSAPSVPAQSNKMAEKIFEQLNIIAPSPKEKQSGQKSVTGNTSNSMSKKPVLQDT
GPSSMYDPSSSLKFQDFDGTNGPLDPDLNGSLLKKDKLNMIVGESSKVVSSDKPTFLGNS
VSASTSRKPGFKMAVIEDLPELDDDLEVPIPSKSLSSKVEVKTTEQKSDPTRKEQKIEQN
ILVESNLMKKKNAVGSPVSEQPVASLSKTVSSSGGLLSSNDPGKAVPNASVDNNAGFAFS
NAPPGTRPATSVSAMPLASVNDDKQMVASNTSVGLKQSIAPDLETPNVKNKSTFGQSVTK
LTTLDSTSSDRADKTEKAEDVIKSSDKMVPATASTTLNAPLHFGSAAFTSASLSNGFSNS
SSPKLPIVPPTDKPAVSSAASTMFAVSSSSPAISSSSSSPAFAAFNFSSSTSVGFSMVPS
AKSDGTTAEVKPASTLSFGTGGAADEVKSTVPDSASKPSSKLLASPISSSPVTSVPTFSQ
VTASSDAAGAATAAPSNTSTAPGVQATSTTPFTFPSSGNSLFGFSSPAQSTGLSTSSVTS
STSQPSAASTLFGSKPTQTEDKMQQPSQSPKPQFGSPFPSVTPGVGASSSGSGTFSFGIG
VSSTGSGTMSFGVGASSSTPGTPSAFGAAAPSSGPGIFSFGAGSSSSGSGTVPFGVGAAS
SGPGTVSFGAGAASSGPGAMSFGAGAASSGPGTVSFGAGASSSGPGTVSFGAGASSSGPG
TVSFGAGASSSGPGTVSFGATTSTSGSGFGNSPFGAGATFANPFSSSSGTGFTFSSASSS
AGASTVASTSVFASTSAASSASTFSNPFSSSSSPPSTFTFGQSASSGSAFAFGAQPAPTF
SSQPSVFSFTSANTSMNSSTPQPPFGMTNTNTAFGMGSPGNDQMNEDSMADDTNQPAPAP
IFGSPFGQQNSTPAAPAFGAPAVQPGGAFQFGGQQQAAQQNPSFPAAGSLEFQGGNFSLG
SGGGGGDKSNRRMIKVKRVPKKRFRGRPRPTAMGNTCVGPSITKNGFFQSVSTVLWKAPQ
DGDALPAAANGPSGGSPGRSPPPALPKPASDVQVMVQSKAPEPVKIATSQSEPAPKPAKQ
DAKPAAAPAAAANPSSNSSGEAPRPRPKVPQVKRVSSAGLLVGSVLKRKTENLKDKYSLG
RRLGQGQFGTTYLCVERSTGKEFACKSILKRKLVTDDDVEDVRREIQIMYHLAGHPNVIS
IRGAYEDAVAVHLVMELCAGGELFDRIVQRGHYTERKAAELARVIVGVVEVCHSMGVMHR
DLKPENFLFVDQKEEAALKTIDFGLSIFFRPGQIFTDVVGSPYYVAPEVLKKKYGPEADV
WSAGVIIYILLCGVPPFWAENEQGIFEEVLHGKLDFESEPWPSISEGAKDLVRRMLIRDP
KKRLTAHEVLRHPWVQVGGLAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIAENLSEDEI
AGLKEMFKMIDTDNSGSITFEELKVGLKKVGANLQESEIQALMQAADVDNSGTIDYGEFI
AATLHLNKVEREDHLFAAFQYFDKDGSGYITADELQLACEEFGLGDVKLEDMIGEVDQDN
DGRIDYNEFVAMMQKPTLGLPKKAGGLQNSFSIGFREALRI
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgagcccgtacgccggctccggcgcaggcgccggagggaagatccggcggcgc
ccgccgacccgcgccgcctccacgccctacgagcggccccccgccgccgccgccgcgcac
cgcctcgcggccgctgccgcagcggcgtccgcatcctcggggccgggcggggagggcggg
agcggcggctgggtgtcccggctcgtggacccggcctcccgcctcatcgctggcggcgcc
gcgcggctcttcggctcggtgttccgcaagcgcctcgccccgccgccggccccgtcgccg
caattgtcgtcgcctcacggaagaaataatgatccaacacaagacttccctgattcaact
aacgttgattcgcctccactccctgagggtggaatggataaagggaagaacatagccgcc
acatcagatgacaaagcattgtctgaagtagagcacttgttaatgcggaaaacattcact
agggttgagttcgatcgtcttacagacttgttgcgtgcaagaaccattgagcctgatcca
cctacatctattgtttcccgcgaggaaaagaatgaaggtatcagaattgatggaatagga
ggctccacttcacaccagatggctgcagaatctccgactgttaaagtacatagtcatggt
gctaggtctcctgcagaactcgccaaacaatatatgagctcccgttattcgaggggaccc
ccatcaagtagtctgcgaagccgattgtttcttgagaacaaaggtgaagcaagcaacaat
gcctatgataggagacctgaaccaccaattgttcaggcaccgatcgaatttgggaatgaa
aaccctgggctccctgttaatggctatgggacttcgggattacgggggcggtcagcgata
tatagaatgtcccgctctccttattttaagggttcgagctctagtgatgtgaacacattt
tcattgtcccaacgagcacaaagttcgcatatcggtggcaggcaggtcttaaaacgacga
gggggtgacttagagaatgaagttggatctataggtcccattcgtagaattcggcagaag
tcaaatatgatgtctccttttagagatgctcgtgcaatttctcgaggaaaccttcttact
agccgtacaagtggttctgatttcactgaagacagcacatccatccaggaatctccgagc
tcaaaaaggctattgcttggaacaacatctgcgagacccctagaatcccataagaatgga
gatagtaaacctagtgatagcgctccatccgtaccagctcaatcaaacaaaatggcagag
aagatatttgagcagcttaatataatagctccatctcctaaagagaagcagtctggacag
aaatctgtaactggtaatactagtaattcaatgtcgaagaaacctgttttgcaagatact
gggccaagcagtatgtatgacccatctagttccctgaaatttcaagattttgatggtaca
aatggaccccttgacccagacttgaatggttctctgttgaagaaagacaagctaaatatg
atagtaggtgaatcatcaaaagttgtttcgtctgataaacctacctttttagggaactca
gtttctgcttctacatcacggaaaccaggctttaaaatggctgtgatagaggacttgcca
gagttggatgatgatctggaggtccccattccctccaagagtctatcaagtaaggtagag
gttaaaacaactgagcagaaatctgacccaactagaaaagagcagaaaattgaacaaaat
atattggttgaatcaaacttaatgaagaagaagaacgctgttggttctccggttagtgag
cagcctgtagcatcattatctaaaactgtctcttcatctggtggtttgctttcatcaaat
gatcctggaaaagcagttcccaatgcttctgtggataacaacgctggttttgcattctca
aatgcgcctcctggcacccgtcctgcaactagtgtgtcagcaatgccgcttgcttcagtt
aatgacgacaaacagatggttgcttcaaatactagtgttggcctcaagcagtctattgca
ccagatttggaaacaccaaatgttaaaaacaaatcaacatttgggcagagtgtcaccaag
ctcacaacattggacagcactagttctgacagagctgataaaacagaaaaagcggaagat
gtcattaaatcatcagacaagatggtgccagcaaccgcatcaacaacactgaatgcccct
ctccattttggttctgctgcatttacttctgcgagcctgagcaatggcttttcaaactct
tcatcaccaaagctcccaattgtcccacctactgataaacctgctgtcagctcagctgct
tccaccatgtttgctgtgtccagtagcagtccagctatttcatcgtcatcatcatctcca
gcatttgcagcatttaatttttcttccagtacttctgttggcttttcaatggtaccatca
gctaaatcagatggcacaactgccgaggtaaagccagctagcaccttatcatttgggaca
ggaggtgctgcagatgaagtgaaatctacagtcccagattcagccagcaagccatcatca
aaacttcttgcttcacctatttcaagttctccggtcacatctgtgcctactttctctcaa
gttacagcttcaagtgatgctgcaggcgctgcaacggctgcaccatctaatacttccact
gctcctggtgttcaggctacttcaaccacaccattcacattcccaagctccggaaacagc
ctttttgggttcagctcgccagcccaatctactggcctcagcacatcatcggttactagc
tctacctctcaaccatctgctgctagcacactctttggtagtaagccgacgcagacagag
gacaaaatgcaacaaccatcccagagtccaaaaccacaatttggctcaccattcccgtcc
gtgactcctggtgttggagcttcctcatctggatctgggaccttctcttttggaattgga
gtttcttcgactggttccgggaccatgtcttttggtgttggagcttcatcatcaacacct
ggaactccatcagctttcggggcagcagctccctcatcaggacctggtattttctctttt
ggggcaggatcttcctcatcaggatctgggactgttccctttggagttggagctgcctca
tctggacctgggaccgtgtcttttggagcaggagctgcctcatctggacctggggccatg
tcttttggagcaggagctgcctcatctggacctgggaccgtgtcttttggagcaggagcc
tcctcatctggacctgggaccgtgtcttttggagcaggagcctcctcatctggacctggg
accgtgtcttttggagcaggagcttcctcatctggacctggaactgtctcgtttggagca
acaacatccacatcgggatccggatttggcaattcaccatttggagctggagctacattt
gcgaacccattcagctccagctcaggtactgggtttacattttcttcagctagctcttct
gctggtgcatcaacagtggccagtacaagtgtatttgccagcacctccgcagcttcatca
gcctccactttcagcaaccctttcagctcaagttcatcccctccaagcacatttacgttt
gggcaatcagcctcttcaggcagtgcttttgcatttggagcgcagccagctccaactttc
tcatctcaaccttctgttttctcatttacctcagcaaacacaagcatgaactcgtctact
cctcagcctccatttggaatgacaaatacaaacacggcctttggcatgggctcccccgga
aatgatcagatgaatgaagacagcatggcagatgacacgaaccaaccagcaccagcaccg
atatttggttcaccctttggacagcagaatagtacacctgctgccccggcatttggcgct
cctgcagtccagccaggtggagcttttcagttcgggggccaacaacaagcagcgcagcag
aatccgtccttcccagctgccggcagtctagagtttcagggtgggaatttctcattgggc
agcggcggcggcggcggtgacaagtcgaacagaagaatgatcaaggtcaaaagggtacct
aagaagagattccgcggtcggccccggcccaccgcgatggggaacacgtgcgtcggcccc
agcatcaccaagaacggcttcttccagtccgtctccaccgtgctgtggaaggcgccgcag
gacggcgacgcgctgcccgccgcggccaatggtccctccggcggcagcccgggccgatcg
ccgccgccggcgctgccgaagccggcgtccgacgtgcaggtcatggtgcagagcaaggcg
cctgagcccgtcaagatcgccacctcccagtcggagccggcgcccaagcccgcgaagcag
gacgccaagccggccgccgcccccgccgctgccgccaaccccagctccaactcatccggc
gaggcgcccaggccgcggcccaaggtgccgcaggtgaagcgcgtgtccagcgccgggctg
ctcgtcggctccgtgctcaagcgcaagacggagaacctcaaggacaagtacagcctgggg
cgccggctcgggcagggccagttcggcaccacgtacctctgcgtggagcggagcacgggg
aaggagttcgcgtgcaagtccatcctcaagcggaagctcgtcaccgacgacgacgtcgag
gacgtgcgccgggagatccagataatgtaccacctggccgggcaccccaacgtgatctcc
atccgcggcgcctacgaggacgccgtggccgtgcacctagtcatggagctctgcgccggc
ggcgagctgttcgacaggatcgtgcagagggggcactacaccgagcggaaggccgccgag
ctcgccagggtcatcgtcggcgtcgtcgaggtgtgccactccatgggcgtcatgcatcgg
gatctcaagccagagaactttctcttcgttgaccagaaggaggaggccgctctcaagaca
attgactttggtctctccattttctttcggcctggtcaaatatttacggatgttgtcggt
agcccttactatgtcgcaccagaggtcctcaagaagaaatatggccccgaggcagatgtt
tggagtgctggtgtaatcatttacatcttgctttgtggtgtgccaccattctgggcagag
aacgagcaaggtatatttgaagaggttttacatgggaaacttgattttgagtcagagcct
tggcctagcatctctgaaggcgccaaagatcttgtgagacgaatgcttattagggaccca
aagaagagactgactgctcatgaagttctacggcatccatgggtccaggttggtggcctg
gctcctgataagccgttggattctgctgttctgtcccgtatgaaacagttctcagctatg
aataagctgaaaaagatggctcttagggtgattgccgagaacctatccgaggacgagatc
gccggcctgaaagaaatgttcaagatgatagacacagacaacagtgggtccatcaccttc
gaagagctgaaggtcggcttgaaaaaggttggcgccaatctccaggagtccgagatccag
gcgctcatgcaagcagcggacgtggataacagcggcacgatcgactacggcgagttcatc
gcggcgacgctgcacctgaacaaggtggagcgggaggaccacctgttcgcggcgttccag
tacttcgacaaggacggcagcgggtacatcaccgccgacgagctgcagctggcgtgcgag
gagttcgggctgggcgacgtgaagctcgaggacatgatcggggaggtcgaccaggacaac
gacgggcgcatagactacaacgagttcgtggccatgatgcagaagcccacgctggggctc
cccaagaaggccggcggcctgcagaacagcttcagcatcggcttcagggaggccttgaga
atataa
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